@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MARK2_: (2014-08-17 )
MSSARTPLPTLNERDTEQPTLGHLDSKPSSKSNMIRGRNSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTELMVSMGYTREEIQDSLVGQRYNEVMATYLLLGYKSSELEGDTITLKPRPSADLTNSSAPSPSHKVQRSVSANPKQRRFSDQAAGPAIPTSNSYSKKTQSNNAENKRPEEDRESGRKASSTAKVPASPLPGLERKKTTPTPSTNSVLSTSTNRSRNSPLLERASLGQASIQNGKDSLTMPGSRASTASASAAVSAARPRQHQKSMSASVHPNKASGLPPTESNCEVPRPSTAPQRVPVASPSAHNISSSGGAPDRTNFPRGVSSRSTFHAGQLRQVRDQQNLPYGVTPASPSGHSQGRRGASGSIFSKFTSKFVRRNLSFRFARRNLNEPESKDRVETLRPHVVGSGGNDKEKEEFREAKPRSLRFTWSMKTTSSMEPNEMMREIRKVLDANSCQSELHEKYMLLCMHGTPGHEDFVQWEMEVCKLPRLSLNGVRFKRISGTSMAFKNIASKIANELKL

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]



ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]



ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]



STU_B_2(1XJD)

[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]



82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]



CHAIN_H_8(3IEC)
MARK2_HUMAN
[Raw transfer]
-
S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]



07U_A_2(3TXO)

[Raw transfer]



YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



CHAIN_F_6(3IEC)
MARK2_HUMAN
[Raw transfer]
-
CHAIN_G_7(3IEC)
MARK2_HUMAN
[Raw transfer]
-
22 PsiBlast_CBE 93.9999%-112 - C1 -3IEC 10.5 MARK2_HUMAN
23 PsiBlast_CBE 93.8299%-112 - C1 -3IEC 9.9 MARK2_HUMAN
21 PsiBlast_CBE 93.7799%-111 - C1 -3IEC 9.7 MARK2_HUMAN
37 HHSearch 67.8642% -89 - C1 -4BKY 7.9 MELK_HUMAN
18 PsiBlast_PDB 62.7948%-100 - C1 -3AQV 7.4 AAPK2_HUMAN
19 PsiBlast_PDB 60.4342% -88 - C1 -4BL1 6.4 MELK_HUMAN
52 HHSearch 58.3735% -92 - C1 -1RDQ 6.7 KAPCA_MOUSE
49 HHSearch 57.2536% -95 - C1 -2Y0A 2.8 DAPK1_HUMAN
55 HHSearch 56.8139% -86 - C1 -3SOA 3.8 KCC2A_HUMAN
53 HHSearch 55.6337% -97 - C1 -3TKI 6.0 CHK1_HUMAN
39 HHSearch 55.5938%-101 * C1 *4GV1 6.7 AKT1_HUMAN
41 HHSearch 55.0937% -88 - C1 -2YEX 4.3 CHK1_HUMAN
50 HHSearch 55.0236% -90 - C1 -3TXO 6.0
57 HHSearch 51.7834% -83 - C1 -1XJD 6.5