@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MAST3_HUMAN: (2014-08-17 )
MDESSLLRRRGLQKELSLPRRGRGCRSGNRKSLVVGTPSPTLSRPLSPLSVPTAGSSPLDSPRNFSAASALNFPFARRADGRRWSLASLPSSGYGTNTPSSTLSSSSSSRERLHQLPFQPTPDELHFLSKHFRSSENVLDEEGGRSPRLRPRSRSLSPGRATGTFDNEIVMMNHVYRERFPKATAQMEGRLQEFLTAYAPGARLALADGVLGFIHHQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAHERSDSEEVSFIVQLVRKLLIIISRPARLLECLEFDPEEFYHLLEAAEGHAREGQGIKTDLPQYIIGQLGLAKDPLEEMVPLSHLEEEQPPAPESPESRALVGQSRRKPCESDFETIKLISNGAYGAVYLVRHRDTRQRFAIKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETRRHLCMVMEYVEGGDCATLLKNMGPLPVDMARLYFAETVLALEYLHNYGIVHRDLKPDNLLITSLGHIKLTDFGLSKIGLMSMATNLYEGHIEKDAREFIDKQVCGTPEYIAPEVIFRQGYGKPVDWWAMGVVLYEFLVGCVPFFGDTPEELFGQVVSDEIMWPEGDEALPADAQDLITRLLRQSPLDRLGTGGTHEVKQHPFFLALDWAGLLRHKAEFVPQLEAEDDTSYFDTRSERYRHLGSEDDETNDEESSTEIPQFSSCSHRFSKVYSSSEFLAVQPTPTFAERSFSEDREEGWERSEVDYGRRLSADIRLRSWTSSGSSCQSSSSQPERGPSPSLLNTISLDTMPKFAFSSEDEGVGPGPAGPKRPVFILGEPDPPPAATPVMPKPSSLSADTAALSHARLRSNSIGARHSTPRPLDAGRGRRLGGPRDPAPEKSRASSSGGSGGGSGGRVPKSASVSALSLIITADDGSGGPLMSPLSPRSLSSNPSSRDSSPSRDPSPVCGSLRPPIVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALENTSIKVGPARKNVAKGRMARRSKRSRRRETQDRRKSLFKKISKQTSVLHTSRSFSSGLHHSLSSSESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQSADKLGTGERLDGEAGRRTRGPEAELVVMRRLHLSERRDSFKKQEAVQEVSFDEPQEEATGLPTSVPQIAVEGEEAVPVALGPTGRD

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A03_A_3(3AGL)
KAPCA_HUMAN
[Raw transfer]




A67_A_2(3AGM)
KAPCA_HUMAN
[Raw transfer]

-

ANP_A_7(1CDK)
KAPCA_PIG
[Raw transfer]




IQB_A_3(3VQH)
KAPCA_HUMAN
[Raw transfer]




3SB_A_3(3OXT)
KAPCA_HUMAN
[Raw transfer]




S69_A_3(3POO)
KAPCA_HUMAN
[Raw transfer]




1SB_A_3(3OVV)
KAPCA_HUMAN
[Raw transfer]




4SB_A_3(3P0M)
KAPCA_HUMAN
[Raw transfer]




2SB_A_3(3OWP)
KAPCA_HUMAN
[Raw transfer]




H52_C_3(2GNH)
KAPCA_BOVIN
[Raw transfer]




M77_C_3(2GNI)
KAPCA_BOVIN
[Raw transfer]




H52_C_3(2GNL)
KAPCA_BOVIN
[Raw transfer]




Y27_C_3(2GNJ)
KAPCA_BOVIN
[Raw transfer]




STU_C_3(1STC)
KAPCA_BOVIN
[Raw transfer]




L9L_A_5(3L9L)
KAPCA_HUMAN
[Raw transfer]




YTP_A_3(3OOG)
KAPCA_HUMAN
[Raw transfer]




Y27_C_3(2GNF)
KAPCA_BOVIN
[Raw transfer]




BUD_A_4(3POO)
KAPCA_HUMAN
[Raw transfer]




BUD_B_4(3OVV)
KAPCA_HUMAN
[Raw transfer]




CHAIN_I_2(1CMK)
KAPCA_PIG
[Raw transfer]

-

9 PsiBlast_PDB 84.0637% -99 - C1 -3VQH 5.0 KAPCA_HUMAN
1 PsiBlast_PDB 83.8237%-102 - C1 -1CMK 4.6 KAPCA_PIG
7 PsiBlast_PDB 83.2937% -94 - C1 -2GNI 3.9 KAPCA_BOVIN
14 PsiBlast_PDB 83.1037% -98 - C1 -3OWP 6.0 KAPCA_HUMAN
18 PsiBlast_PDB 82.9837% -96 - C1 -2GNJ 3.8 KAPCA_BOVIN
12 PsiBlast_PDB 82.8137% -98 - C1 -3OOG 3.4 KAPCA_HUMAN
19 PsiBlast_PDB 82.5937% -99 * C1 *2GNL 3.8 KAPCA_BOVIN
13 PsiBlast_PDB 82.3637% -97 - C1 -3OVV 6.3 KAPCA_HUMAN
17 PsiBlast_PDB 81.7737%-101 - C1 -3POO 6.6 KAPCA_HUMAN
6 PsiBlast_PDB 81.7237% -96 - C1 -2GNH 4.7 KAPCA_BOVIN
4 PsiBlast_PDB 81.6537% -96 - C1 -2GNF 4.1 KAPCA_BOVIN
2 PsiBlast_PDB 81.1937%-101 - C1 -1CDK 6.8 KAPCA_PIG
10 PsiBlast_PDB 81.0737% -94 - C1 -3AGM 5.1 KAPCA_HUMAN
16 PsiBlast_PDB 80.8637% -99 - C1 -3P0M 6.2 KAPCA_HUMAN
11 PsiBlast_PDB 80.7937% -95 - C1 -3L9L 6.3 KAPCA_HUMAN
15 PsiBlast_PDB 80.1037% -93 - C1 -3OXT 5.8 KAPCA_HUMAN
8 PsiBlast_PDB 79.8037% -94 - C1 -3AGL 4.6 KAPCA_HUMAN
20 PsiBlast_PDB 79.2137% -95 - C1 -1STC 5.6 KAPCA_BOVIN