@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MELK_H: (2014-08-17 )
MKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISLWQYDHLTATYLLLLAKKARGKPVRLRLSSFSCGQASATPFTDIKSNNWSLEDVTASDKNYVAGLIDYDWCEDDLSTGAATPRTSQFTKYWTESNGVESKSLTPALCRTPANKLKNKENVYTPKSAVKNEEYFMFPEPKTPVNKNQHKREILTTPNRYTTPSKARNQCLKETPIKIPVNSTGTDKLMTGVISPERRCRSVELDLNQAHMEETPKRKGAKVFGSLERGLDKVITVLTRSKRKGSARDGPRRLKLHYNVTTTRLVNPDQLLNEIMSILPKKHVDFVQKGYTLKCQTQSDFGKVTMQFELEVCQLQKPDVVGIRRQRLKGDAWVYKRLVEDILSSCKV

Atome Classification :

(13 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_4(2YEX)
CHK1_HUMAN
[Raw transfer]




GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]




ANP_A_2(4BL1)
MELK_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




1WS_A_2(4BKZ)
MELK_HUMAN
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




ANP_A_4(3HKO)
?
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




07U_A_2(3TXO)

[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CHAIN_E_5(3IEC)
MARK2_HUMAN
[Raw transfer]

-

2 PsiBlast_PDB 97.1899%-132 - C1 -4BKY 8.4 MELK_HUMAN
3 PsiBlast_PDB 96.3099%-134 - C1 -4BKZ 6.2 MELK_HUMAN
1 PsiBlast_PDB 95.1099%-129 - C1 -4BL1 6.7 MELK_HUMAN
15 PsiBlast_PDB 70.4343%-116 - C1 -3IEC 8.9 MARK2_HUMAN
45 HHSearch 64.5237%-127 - C1 -3HKO 5.4 ?
17 PsiBlast_PDB 58.5447%-117 - C1 -3AQV 5.8 AAPK2_HUMAN
50 HHSearch 58.4835%-116 - C1 -1RDQ 6.7 KAPCA_MOUSE
43 HHSearch 57.9933%-117 - C1 -2Y0A 2.6 DAPK1_HUMAN
38 HHSearch 57.3334%-125 - C1 -4GV1 5.8 AKT1_HUMAN
52 HHSearch 50.8334%-109 - C1 -3TKI 6.4 CHK1_HUMAN
44 HHSearch 50.8232%-108 - C1 -3TXO 6.1
37 HHSearch 50.8134%-102 - C1 -2YEX 3.5 CHK1_HUMAN
47 HHSearch 50.2330%-104 - C1 -1XJD 5.4