@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MK04_H: (2014-08-18 )
MAEKGDCIASVYGYDLGGRFVDFQPLGFGVNGLVLSAVDSRACRKVAVKKIALSDARSMKHALREIKIIRRLDHDNIVKVYEVLGPKGTDLQGELFKFSVAYIVQEYMETDLARLLEQGTLAEEHAKLFMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIVDQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGRMLFAGAHELEQMQLILETIPVIREEDKDELLRVMPSFVSSTWEVKRPLRKLLPEVNSEAIDFLEKILTFNPMDRLTAEMGLQHPYMSPYSCPEDEPTSQHPFRIEDEIDDIVLMAANQSQLSNWDTCSSRYPVSLSSDLEWRPDRCQDASEVQRDPRAGSAPLAEDVQVDPRKDSHSSSERFLEQSHSSMERAFEADYGRSCDYKVGSPSYLDKLLWRDNKPHHYSEPKLILDLSHWKQAAGAPPTATGLADTGAREDEPASLFLEIAQWVKSTQGGPEHASPPADDPERRLSASPPGRPAPVDGGASPQFDLDVFISRALKLCTKPEDLPDNKLGDLNGACIPEHPGDLVQTEAFSKERW

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]



ANP_A_3(4FMQ)
MK01_HUMAN
[Raw transfer]



ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]



Z8B_A_2(3QYZ)
MK01_RAT
[Raw transfer]



FRZ_B_2(1TVO)
MK01_HUMAN
[Raw transfer]



046_A_2(4O2Z)
?
[Raw transfer]



KQ7_A_2(3KQ7)
MK14_HUMAN
[Raw transfer]



F29_B_2(1WZY)
MK01_HUMAN
[Raw transfer]



FMT_A_13(4F6U)
CDK8_HUMAN
[Raw transfer]



EDO_A_4(4FA2)
MK14_HUMAN
[Raw transfer]



PEG_A_7(4F9Y)
MK14_HUMAN
[Raw transfer]



BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]



DMS_A_5(3QYZ)
MK01_RAT
[Raw transfer]



DMS_A_4(3QYZ)
MK01_RAT
[Raw transfer]
3 PsiBlast_PDB 75.8942%-105 - C1 -4FMQ 6.5 MK01_HUMAN
33 HHSearch 75.5935% -97 * C1 *4IC7 4.6 MK07_HUMAN
34 HHSearch 75.0341% -99 - C1 -3QYZ 3.8 MK01_RAT
7 PsiBlast_PDB 74.5641%-103 - C1 -1TVO 3.6 MK01_HUMAN
43 HHSearch 73.9036%-102 - C1 -4O2Z 7.5 ?
41 HHSearch 72.6035%-100 - C1 -2B9H 4.8 FUS3_YEAST
5 PsiBlast_PDB 72.3141%-101 - C1 -1WZY 3.9 MK01_HUMAN
10 PsiBlast_PDB 70.4330%-107 - C1 -4FA2 3.5 MK14_HUMAN
9 PsiBlast_PDB 66.8930%-106 - C1 -4F9Y 2.1 MK14_HUMAN
14 PsiBlast_PDB 65.0430%-102 - C1 -3KQ7 8.8 MK14_HUMAN
37 HHSearch 65.0233%-105 - C1 -2FST 3.2 MK14_HUMAN
50 HHSearch 54.5933% -99 - C1 -4F6U 3.1 CDK8_HUMAN