@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MK06_H: (2014-08-18 )
MAEKFESLMNIHGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMDEPISSHPFHIEDEVDDILLMDETHSHIYNWERYHDCQFSEHDWPVHNNFDIDEVQLDPRALSDVTDEEEVQVDPRKYLDGDREKYLEDPAFDTNYSTEPCWQYSDHHENKYCDLECSHTCNYKTRSSSYLDNLVWRESEVNHYYEPKLIIDLSNWKEQSKEKSDKKGKSKCERNGLVKAQIALEEASQQLAGKEREKNQGFDFDSFIAGTIQLSSQHEPTDVVDKLNDLNSSVSQLELKSLISKSVSQEKQEKGMANLAQLEALYQSSWDSQFVSGGEDCFFINQFCEVRKDEQVEKENTYTSYLDKFFSRKEDTEMLETEPVEDGKLGERGHEEGFLNNSGEFLFNKQLESIGIPQFHSPVGSPLKSIQATLTPSAMKSSPQIPHQTYSSILKHLN

Atome Classification :

(11 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4FMQ)
MK01_HUMAN
[Raw transfer]



ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]



ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]



38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]



FRZ_B_2(1TVO)
MK01_HUMAN
[Raw transfer]



046_A_2(4O2Z)
?
[Raw transfer]



F29_B_2(1WZY)
MK01_HUMAN
[Raw transfer]



FMT_A_13(4F6U)
CDK8_HUMAN
[Raw transfer]



GOL_A_12(3IGO)
?
[Raw transfer]



OLO_C_3(4ERK)
MK01_RAT
[Raw transfer]



SB4_B_2(3ERK)
MK01_RAT
[Raw transfer]



BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]
18 PsiBlast_PDB 76.2641%-102 - C1 -4ERK 5.0 MK01_RAT
32 HHSearch 75.3740%-103 - C1 -4IC7 4.5 MK07_HUMAN
17 PsiBlast_PDB 74.8741% -99 - C1 -3ERK 6.2 MK01_RAT
12 PsiBlast_PDB 74.4941% -96 - C1 -1WZY 3.8 MK01_HUMAN
3 PsiBlast_PDB 74.0345%-104 - C1 -4FMQ 6.8 MK01_HUMAN
40 HHSearch 73.5338%-105 - C1 -2B9H 4.9 FUS3_YEAST
14 PsiBlast_PDB 73.1841%-100 - C1 -1TVO 4.8 MK01_HUMAN
42 HHSearch 69.3038% -97 - C1 -4O2Z 8.5 ?
36 HHSearch 67.3037%-107 - C1 -2FST 3.2 MK14_HUMAN
52 HHSearch 56.5731%-108 - C1 -4BGQ 5.3 CDKL5_HUMAN
49 HHSearch 55.0233% -97 - C1 -4F6U 3.1 CDK8_HUMAN