@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MKNK2_: (2014-08-18 )
MVQKKPAELQGFHRSFKGQNPFELAFSLDQPDHGDSDFGLQCSARPDMPASQPIDIPDAKKRGKKKKRGRATDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLPTPMVLQRNSCAKDLTSFAAEAIAMNRQLAQHDEDLAEEEAAGQGQPVLVRATSRCLQLSPPSQSKLAQRRQRASLSSAPVVLVGDHA

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BK1_A_5(3NCG)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



ANP_A_5(3IGO)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



VGG_A_2(2WEI)
?
[Raw transfer]



BK1_A_2(3I7B)
?
[Raw transfer]



ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]



BK3_A_2(3N51)
?
[Raw transfer]



BK6_A_2(3T3U)
?
[Raw transfer]



BK5_A_2(3SXF)
?
[Raw transfer]



21E_A_2(4M84)
?
[Raw transfer]



STU_A_3(2HW7)
MKNK2_HUMAN
[Raw transfer]



BK7_A_2(4MXA)
?
[Raw transfer]



1FB_A_2(4IHP)
?
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_A_6(2X4F)
MYLK4_HUMAN
[Raw transfer]



EDO_A_3(3I7B)
?
[Raw transfer]



EDO_B_9(2JAM)
KCC1G_HUMAN
[Raw transfer]
3 PsiBlast_PDB 92.6199%-132 - C1 -2HW7 8.7 MKNK2_HUMAN
41 HHSearch 66.5442%-112 - C1 -3MWU 2.8 ?
46 HHSearch 66.2235%-111 - C1 -1PHK 5.5 PHKG1_RABIT
12 PsiBlast_PDB 65.5236%-119 - C1 -4IHP 2.2 ?
6 PsiBlast_PDB 65.4336%-105 - C1 -3NCG 2.8 ?
4 PsiBlast_PDB 64.7336%-103 - C1 -3IGO 6.1 ?
40 HHSearch 63.6435%-100 - C1 -2Y0A 2.3 DAPK1_HUMAN
18 PsiBlast_PDB 63.3936%-114 - C1 -4M84 4.6 ?
17 PsiBlast_PDB 62.5736%-114 - C1 -3T3U 3.8 ?
20 PsiBlast_PDB 62.5636%-112 - C1 -4MXA 4.8 ?
14 PsiBlast_PDB 62.2436%-112 - C1 -3I7B 6.2 ?
15 PsiBlast_PDB 62.1236%-113 - C1 -3N51 2.2 ?
16 PsiBlast_PDB 61.8036%-111 - C1 -3SXF 2.7 ?
8 PsiBlast_PDB 59.8737% -99 - C1 -2WEI 6.6 ?
47 HHSearch 59.2332%-110 - C1 -2X4F 3.4 MYLK4_HUMAN
52 HHSearch 56.0739%-109 - C1 -2JAM 2.8 KCC1G_HUMAN