@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MRCKB_HUMAN: (2014-08-18 )
MSAKVRLKKLEQLLLDGPWRNESALSVETLLDVLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGSHTGFSGLHLPFIGFTFTTESCFSDRGSLKSIMQSNTLTKDEDVQRDLEHSLQMEAYERRIRRLEQEKLELSRKLQESTQTVQSLHGSSRALSNSNRDKEIKKLNEEIERLKNKIADSNRLERQLEDTVALRQEREDSTQRLRGLEKQHRVVRQEKEELHKQLVEASERLKSQAKELKDAHQQRKLALQEFSELNERMAELRAQKQKVSRQLRDKEEEMEVATQKVDAMRQEMRRAEKLRKELEAQLDDAVAEASKERKLREHSENFCKQMESELEALKVKQGGRGAGATLEHQQEISKIKSELEKKVLFYEEELVRREASHVLEVKNVKKEVHDSESHQLALQKEILMLKDKLEKSKRERHNEMEEAVGTIKDKYERERAMLFDENKKLTAENEKLCSFVDKLTAQNRQLEDELQDLAAKKESVAHWEAQIAEIIQWVSDEKDARGYLQALASKMTEELEALRSSSLGSRTLDPLWKVRRSQKLDMSARLELQSALEAEIRAKQLVQEELRKVKDANLTLESKLKDSEAKNRELLEEMEILKKKMEEKFRADTGLKLPDFQDSIFEYFNTAPLAHDLTFRTSSASEQETQAPKPEASPSMSVAASEQQEDMARPPQRPSAVPLPTTQALALAGPKPKAHQFSIKSFSSPTQCSHCTSLMVGLIRQGYACEVCSFACHVSCKDGAPQVCPIPPEQSKRPLGVDVQRGIGTAYKGHVKVPKPTGVKKGWQRAYAVVCDCKLFLYDLPEGKSTQPGVIASQVLDLRDDEFSVSSVLASDVIHATRRDIPCIFRVTASLLGAPSKTSSLLILTENENEKRKWVGILEGLQSILHKNRLRNQVVHVPLEAYDSSLPLIKAILTAAIVDADRIAVGLEEGLYVIEVTRDVIVRAADCKKVHQIELAPREKIVILLCGRNHHVHLYPWSSLDGAEGSFDIKLPETKGCQLMATATLKRNSGTCLFVAVKRLILCYEIQRTKPFHRKFNEIVAPGSVQCLAVLRDRLCVGYPSGFCLLSIQGDGQPLNLVNPNDPSLAFLSQQSFDALCAVELESEEYLLCFSHMGLYVDPQGRRARAQELMWPAAPVACSCSPTHVTVYSEYGVDVFDVRTMEWVQTIGLRRIRPLNSEGTLNLLNCEPPRLIYFKSKFSGAVLNVPDTSDNSKKQMLRTRSKRRFVFKVPEEERLQQRREMLRDPELRSKMISNPTNFNHVAHMGPGDGMQVLMDLPLSAVPPSQEERPGPAPTNLARQPPSRNKPYISWPSSGGSEPSVTVPLRSMSDPDQDFDKEPDSDSTKHSTPSNSSNPSGPPSPNSPHRSQLPLEGLEQPACDT

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




M77_A_3(3TKU)
MRCKB_HUMAN
[Raw transfer]




ANP_A_5(2V55)
ROCK1_HUMAN
[Raw transfer]




GMG_A_2(3HDN)
SGK1_HUMAN
[Raw transfer]




M77_D_4(2ESM)
ROCK1_HUMAN
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




M77_B_6(3TKU)
MRCKB_HUMAN
[Raw transfer]




M77_E_5(2F2U)
ROCK2_BOVIN
[Raw transfer]




HFS_C_3(2ETK)
ROCK1_HUMAN
[Raw transfer]




NM7_B_5(3QFV)
MRCKB_HUMAN
[Raw transfer]




NM7_A_3(3QFV)
MRCKB_HUMAN
[Raw transfer]




Y27_C_3(2ETR)
ROCK1_HUMAN
[Raw transfer]




Y27_C_3(2H9V)
ROCK2_BOVIN
[Raw transfer]




H52_A_3(3D9V)
ROCK1_HUMAN
[Raw transfer]




1WU_A_3(4L6Q)
ROCK2_HUMAN
[Raw transfer]




EDO_A_5(4AW2)
MRCKA_RAT
[Raw transfer]




EDO_B_8(3TKU)
MRCKB_HUMAN
[Raw transfer]




EDO_B_10(3QFV)
MRCKB_HUMAN
[Raw transfer]




21 PsiBlast_CBE 98.01100% -89 - C1 -3TKU 5.2 MRCKB_HUMAN
1 PsiBlast_PDB 97.31100% -85 - C1 -3TKU 4.8 MRCKB_HUMAN
22 PsiBlast_CBE 97.19100% -88 * C1 *3QFV 5.0 MRCKB_HUMAN
2 PsiBlast_PDB 97.08100% -88 - C1 -3QFV 3.9 MRCKB_HUMAN
3 PsiBlast_PDB 94.3078% -89 - C1 -4AW2 2.3 MRCKA_RAT
5 PsiBlast_PDB 78.9947% -81 - C1 -2ESM 4.8 ROCK1_HUMAN
8 PsiBlast_PDB 78.1747% -83 - C1 -3D9V 5.5 ROCK1_HUMAN
7 PsiBlast_PDB 78.0547% -83 - C1 -2ETR 4.5 ROCK1_HUMAN
16 PsiBlast_PDB 78.0447% -87 - C1 -2F2U 4.7 ROCK2_BOVIN
15 PsiBlast_PDB 77.5747% -88 - C1 -4L6Q 5.2 ROCK2_HUMAN
17 PsiBlast_PDB 77.2447% -80 - C1 -2H9V 5.1 ROCK2_BOVIN
6 PsiBlast_PDB 77.0747% -83 - C1 -2ETK 4.2 ROCK1_HUMAN
14 PsiBlast_PDB 75.3048% -80 - C1 -2V55 4.0 ROCK1_HUMAN
18 PsiBlast_PDB 51.5838% -71 - C1 -2R5T 6.7 SGK1_HUMAN
19 PsiBlast_PDB 51.3738% -70 - C1 -3HDM 6.9 SGK1_HUMAN
20 PsiBlast_PDB 48.4738% -65 - C1 -3HDN 7.4 SGK1_HUMAN