@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_MYLK3_: (2014-08-18 )
MSGTSKESLGHGGLPGLGKTCLTTMDTKLNMLNEKVDQLLHFQEDVTEKLQSMCRDMGHLERGLHRLEASRAPGPGGADGVPHIDTQAGWPEVLELVRAMQQDAAQHGARLEALFRMVAAVDRAIALVGATFQKSKVADFLMQGRVPWRRGSPGDSPEENKERVEEEGGKPKHVLSTSGVQSDAREPGEESQKADVLEGTAERLPPIRASGLGADPAQAVVSPGQGDGVPGPAQAFPGHLPLPTKVEAKAPETPSENLRTGLELAPAPGRVNVVSPSLEVAPGAGQGASSSRPDPEPLEEGTRLTPGPGPQCPGPPGLPAQARATHSGGETPPRISIHIQEMDTPGEMLMTGRGSLGPTLTTEAPAAAQPGKQGPPGTGRCLQAPGTEPGEQTPEGARELSPLQESSSPGGVKAEEEQRAGAEPGTRPSLARSDDNDHEVGALGLQQGKSPGAGNPEPEQDCAARAPVRAEAVRRMPPGAEAGSVVLDDSPAPPAPFEHRVVSVKETSISAGYEVCQHEVLGGGRFGQVHRCTEKSTGLPLAAKIIKVKSAKDREDVKNEINIMNQLSHVNLIQLYDAFESKHSCTLVMEYVDGGELFDRITDEKYHLTELDVVLFTRQICEGVHYLHQHYILHLDLKPENILCVNQTGHQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYEFVSFPTDMWSVGVITYMLLSGLSPFLGETDAETMNFIVNCSWDFDADTFEGLSEEAKDFVSRLLVKEKSCRMSATQCLKHEWLNNLPAKASRSKTRLKSQLLLQKYIAQRKWKKHFYVVTAANRLRKFPTSP

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_2(3DFC)
DAPK1_HUMAN
[Raw transfer]



ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]



ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]



ANP_A_4(3HKO)
?
[Raw transfer]



ANP_A_7(3LIJ)
?
[Raw transfer]



ANP_A_8(3Q5I)
?
[Raw transfer]



DRK_A_2(3F3Z)
?
[Raw transfer]



BK3_A_6(3MWU)
?
[Raw transfer]



IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]



DTQ_A_2(3NYV)
?
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]



16X_A_3(2X4F)
MYLK4_HUMAN
[Raw transfer]



DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]



EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
29 HHSearch 87.5870%-108 - C1 -2X4F 6.6 MYLK4_HUMAN
8 PsiBlast_PDB 73.0742% -99 - C1 -2CKE 4.4 DAPK2_HUMAN
6 PsiBlast_PDB 70.5242%-101 - C1 -2YAA 5.0 DAPK2_MOUSE
42 HHSearch 63.4834%-104 - C1 -3Q5I 4.6 ?
37 HHSearch 61.8743% -91 - C1 -2Y0A 2.6 DAPK1_HUMAN
15 PsiBlast_PDB 59.0744% -96 - C1 -2W4K 5.8 DAPK1_HUMAN
44 HHSearch 58.7633% -92 - C1 -3NYV 6.4 ?
41 HHSearch 57.8632% -93 - C1 -3MWU 7.7 ?
49 HHSearch 56.9635%-104 * C1 *3F3Z 6.3 ?
16 PsiBlast_PDB 56.9546%-109 - C1 -4B4L 2.7 DAPK1_HUMAN
39 HHSearch 56.5537%-109 - C1 -3LIJ 4.3 ?
38 HHSearch 56.3834% -79 - C1 -3SOA 3.7 KCC2A_HUMAN
46 HHSearch 53.7134%-100 - C1 -3HKO 5.6 ?
20 PsiBlast_PDB 50.9746% -98 - C1 -3DFC 7.2 DAPK1_HUMAN
40 HHSearch 47.1438% -93 - C1 -2W4O 3.5 KCC4_HUMAN
43 HHSearch 46.5735% -90 - C1 -2JAM 2.2 KCC1G_HUMAN