@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_NEK2_H: (2014-08-18 )
MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIADLVADEQRRNLERRGRQLGEPEKSQDSSPVLSELKLKEIQLQERERALKAREERLEQKEQELCVRERLAEDKLARAENLLKNYSLLKERKFLSLASNPELLNLPSSVIKKKVHFSGESKENIMRSENSESQLTSKSKCKDLKKRLHAAQLRAQALSDIEKNYQLKSRQILGMR

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]



T3M_A_2(2XKD)
NEK2_HUMAN
[Raw transfer]



EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]



BX1_A_2(2XKF)
NEK2_HUMAN
[Raw transfer]



VGK_A_2(2WQO)
NEK2_HUMAN
[Raw transfer]



30E_A_2(2XK7)
NEK2_HUMAN
[Raw transfer]



OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]



XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]



WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]



4VQ_A_2(2XKC)
NEK2_HUMAN
[Raw transfer]



SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]



GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]



430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]



WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]



ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]



WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]



ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]



GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]



5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]



CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]



CK7_A_3(4B9D)
NEK1_HUMAN
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
17 PsiBlast_PDB 89.3799%-117 - C1 -2W5B 5.0 NEK2_HUMAN
12 PsiBlast_PDB 87.97100%-118 - C1 -2XNM 7.7 NEK2_HUMAN
14 PsiBlast_PDB 87.49100%-117 - C1 -2XNO 6.6 NEK2_HUMAN
10 PsiBlast_PDB 86.43100%-123 - C1 -2XKF 6.5 NEK2_HUMAN
1 PsiBlast_PDB 84.58100%-120 - C1 -2W5A 6.3 NEK2_HUMAN
16 PsiBlast_PDB 84.2899%-127 - C1 -2JAV 6.6 NEK2_HUMAN
9 PsiBlast_PDB 83.22100%-121 - C1 -2XKD 6.7 NEK2_HUMAN
11 PsiBlast_PDB 82.97100%-125 - C1 -2XKE 6.4 NEK2_HUMAN
6 PsiBlast_PDB 82.44100%-122 - C1 -2XK7 6.4 NEK2_HUMAN
7 PsiBlast_PDB 81.58100%-124 - C1 -2XK8 6.9 NEK2_HUMAN
2 PsiBlast_PDB 81.18100%-124 - C1 -2WQO 7.3 NEK2_HUMAN
5 PsiBlast_PDB 80.79100%-125 - C1 -2XK6 6.4 NEK2_HUMAN
15 PsiBlast_PDB 80.72100%-116 - C1 -2XNP 9.7 NEK2_HUMAN
8 PsiBlast_PDB 80.33100%-118 - C1 -2XKC 6.7 NEK2_HUMAN
4 PsiBlast_PDB 80.23100%-118 - C1 -2XK4 7.3 NEK2_HUMAN
13 PsiBlast_PDB 79.59100%-113 - C1 -2XNN 6.4 NEK2_HUMAN
3 PsiBlast_PDB 79.35100%-120 - C1 -2XK3 6.1 NEK2_HUMAN
32 HHSearch 58.0242%-104 - C1 -4B9D 4.8 NEK1_HUMAN
33 HHSearch 47.4633% -92 - C1 -1ZY4 2.6 GCN2_YEAST