@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_PHO85_: (2014-08-19 )
MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_4(4KRC)
PHO85_YEAST
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




ATP_A_5(4EOQ)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




SAP_A_7(2PMI)
PHO85_YEAST
[Raw transfer]




EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]




EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]




SQ9_A_5(4CFW)
CDK2_HUMAN
[Raw transfer]




4SP_A_5(1H1S)
CDK2_HUMAN
[Raw transfer]




GOL_A_4(3N9X)
?
[Raw transfer]




6CP_A_5(1H1R)
CDK2_HUMAN
[Raw transfer]




INR_A_5(1E9H)
CDK2_HUMAN
[Raw transfer]




2A6_A_5(1H1Q)
CDK2_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




CMG_A_5(1H1P)
CDK2_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




3 PsiBlast_PDB 96.94100%-111 - C1 -4KRC 6.5 PHO85_YEAST
2 PsiBlast_PDB 90.53100%-115 - C1 -2PMI 5.2 PHO85_YEAST
10 PsiBlast_PDB 82.0955%-115 - C1 -1H1S 6.3 CDK2_HUMAN
19 PsiBlast_PDB 82.0555%-116 - C1 -4EOQ 4.2 CDK2_HUMAN
9 PsiBlast_PDB 81.8155%-115 - C1 -1H1R 6.9 CDK2_HUMAN
7 PsiBlast_PDB 81.6455%-116 - C1 -1H1P 5.3 CDK2_HUMAN
18 PsiBlast_PDB 81.5555%-115 - C1 -4CFW 6.3 CDK2_HUMAN
20 PsiBlast_PDB 80.9355%-116 - C1 -1E9H 5.5 CDK2_HUMAN
8 PsiBlast_PDB 80.7055%-112 - C1 -1H1Q 5.8 CDK2_HUMAN
5 PsiBlast_PDB 78.3855%-116 - C1 -3EZR 6.7 CDK2_HUMAN
6 PsiBlast_PDB 78.3255%-115 - C1 -3EZV 6.7 CDK2_HUMAN
47 HHSearch 77.2556%-109 * C1 *3NIZ 4.8 ?
42 HHSearch 76.3559%-110 - C1 -4AU8 4.7 CDK5_HUMAN
40 HHSearch 72.0338%-102 - C1 -3N9X 2.7 ?
52 HHSearch 71.0635%-105 - C1 -2B9H 5.6 FUS3_YEAST
54 HHSearch 70.4232%-118 - C1 -1J1B 4.4 GSK3B_HUMAN
50 HHSearch 64.9437%-116 - C1 -2FST 3.5 MK14_HUMAN
36 HHSearch 64.4541% -99 - C1 -1UA2 5.1 CDK7_HUMAN
49 HHSearch 64.1237%-101 - C1 -4F6U 8.9 CDK8_HUMAN
35 HHSearch 33.8057% 13 - C1 -4EK4 Error CDK2_HUMAN