@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_SRPK1_: (2014-08-19 )
MERKVLALQARKKRTKAKKDKAQRKSETQHRGSAPHSESDLPEQEEEILGSDDDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPNKQEESESPVERPLKENPPNKMTQEKLEESSTIGQDQTLMERDTEGGAAEINCNGVIEVINYTQNSNNETLRHKEDLHNANDCDVQNLNQESSFLSSQNGDSSTSQETDSCTPITSEVSDTMVCQSSSTVGQSFSEQHISQLQESIRAEIPCEDEQEQEHNGPLDNKGKSTAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS

Atome Classification :

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]




NR9_A_4(3NR9)
CLK2_HUMAN
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]




ANP_A_4(3LLT)
?
[Raw transfer]




3RA_A_3(3RAW)
CLK3_HUMAN
[Raw transfer]




PVB_A_2(2X7G)
SRPK2_HUMAN
[Raw transfer]




V25_A_2(2VAG)
CLK1_HUMAN
[Raw transfer]




V25_A_2(2WU7)

[Raw transfer]




EDO_A_11(2X7G)
SRPK2_HUMAN
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




EDO_A_11(3P1A)
PMYT1_HUMAN
[Raw transfer]




33 HHSearch 64.3332% -92 - C1 -1Z57 5.3 CLK1_HUMAN
36 HHSearch 64.3033%-108 - C1 -3LLT 7.8 ?
1 PsiBlast_PDB 50.6871% -99 - C1 -2X7G 7.9 SRPK2_HUMAN
14 PsiBlast_PDB 37.0635% -97 - C1 -3RAW 5.3 CLK3_HUMAN
13 PsiBlast_PDB 36.3535% -99 - C1 -2WU7 6.1
16 PsiBlast_PDB 34.3434% -97 - C1 -3NR9 6.7 CLK2_HUMAN
18 PsiBlast_PDB 32.2836% -89 - C1 -2VAG 5.8 CLK1_HUMAN