@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_TTK_HU: (2014-08-20 )
MESEDLSGRELTIDSIMNKVRDIKNKFKNEDLTDELSLNKISADTTDNSGTVNQIMMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIALRNLNLQKKQLLSEEEKKNLSASTVLTAQESFSGSLGHLQNRNNSCDSRGQTTKARFLYGENMPPQDAEIGYRNSLRQTNKTKQSCPFGRVPVNLLNSPDCDVKTDDSVVPCFMKRQTSRSECRDLVVPGSKPSGNDSCELRNLKSVQNSHFKEPLVSDEKSSELIITDSITLKNKTESSLLAKLEETKEYQEPEVPESNQKQWQSKRKSECINQNPAASSNHWQIPELARKVNTEQKHTTFEQPVFSVSKQSPPISTSKWFDPKSICKTPSSNTLDDYMSCFRTPVVKNDFPPACQLSTPYGQPACFQQQQHQILATPLQNLQVLASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGKK

Atome Classification :

(7 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1O5_A_2(3W1F)

[Raw transfer]




STU_A_3(3HMO)

[Raw transfer]




S22_A_2(3GFW)

[Raw transfer]




X21_A_2(4C4J)

[Raw transfer]




O22_A_10(3VQU)

[Raw transfer]




HB1_A_3(2IWI)
PIM2_HUMAN
[Raw transfer]




ATP_A_2(3HMN)

[Raw transfer]




7PE_A_2(3CEK)

[Raw transfer]




7PE_A_2(3CEK)

[Raw transfer]




7PE_A_2(3HMO)

[Raw transfer]




7PE_A_3(3HMN)

[Raw transfer]




7PE_A_3(3GFW)

[Raw transfer]




EDO_A_5(2W5A)
NEK2_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




5 PsiBlast_PDB 96.60100%-111 - C1 -3HMN 4.2
6 PsiBlast_PDB 95.87100%-109 - C1 -3HMO 7.7
4 PsiBlast_PDB 95.80100%-110 - C1 -3VQU 5.7
36 HHSearch 95.5899%-107 - C1 -3CEK 4.1
8 PsiBlast_PDB 95.2198%-113 - C1 -3GFW 8.0
3 PsiBlast_PDB 93.06100%-104 - C1 -3W1F 8.3
9 PsiBlast_PDB 91.2598%-105 - C1 -4C4J 11.4