@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_WEE2_H: (2014-08-20 )
MDDKDIDKELRQKLNFSYCEETEIEGQKKVEESREASSQTPEKGEVQDSEAKGTPPWTPLSNVHELDTSSEKDKESPDQILRTPVSHPLKCPETPAQPDSRSKLLPSDSPSTPKTMLSRLVISPTGKLPSRGPKHLKLTPAPLKDEMTSLALVNINPFTPESYKKLFLQSGGKRKIRGDLEEAGPEEGKGGLPAKRCVLRETNMASRYEKEFLEVEKIGVGEFGTVYKCIKRLDGCVYAIKRSMKTFTELSNENSALHEVYAHAVLGHHPHVVRYYSSWAEDDHMIIQNEYCNGGSLQAAISENTKSGNHFEEPKLKDILLQISLGLNYIHNSSMVHLDIKPSNIFICHKMQSESSGVIEEVENEADWFLSANVMYKIGDLGHATSINKPKVEEGDSRFLANEILQEDYRHLPKADIFALGLTIAVAAGAESLPTNGAAWHHIRKGNFPDVPQELSESFSSLLKNMIQPDAEQRPSAAALARNTVLRPSLGKTEELQQQLNLEKFKTATLERELREAQQAQSPQGYTHHGDTGVSGTHTGSRSTKRLVGGKSARSSSFTSGEREPLH

Atome Classification :

(9 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




ANP_B_9(2A19)
E2AK2_HUMAN
[Raw transfer]




839_A_2(2IN6)

[Raw transfer]




770_A_3(2Z2W)

[Raw transfer]




396_A_3(3BI6)

[Raw transfer]




P91_A_3(3CQE)

[Raw transfer]




ANP_A_5(1ZY5)
GCN2_YEAST
[Raw transfer]




ATP_A_7(1ZYD)
GCN2_YEAST
[Raw transfer]




GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]




GOL_C_3(1ZY4)
GCN2_YEAST
[Raw transfer]




EDO_A_3(3P1A)
PMYT1_HUMAN
[Raw transfer]




EDO_A_11(3P1A)
PMYT1_HUMAN
[Raw transfer]




3 PsiBlast_PDB 83.1663% -99 - C1 -2Z2W 7.9
1 PsiBlast_PDB 81.1763% -99 - C1 -2IN6 7.9
4 PsiBlast_PDB 80.0363% -98 - C1 -3BI6 9.1
6 PsiBlast_PDB 79.6863% -98 - C1 -3CQE 8.4
32 HHSearch 60.7636% -87 - C1 -3P1A - PMYT1_HUMAN
34 HHSearch 57.2530% -72 - C1 -2A19 4.7 E2AK2_HUMAN
36 HHSearch 55.9031% -86 - C1 -1ZY4 2.8 GCN2_YEAST
16 PsiBlast_PDB 24.2231% -74 - C1 -1ZY5 4.6 GCN2_YEAST
20 PsiBlast_PDB 23.9131% -72 - C1 -1ZYD 4.2 GCN2_YEAST