@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00071_CDC42_: (2014-08-20 )
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKP

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_A_3(3TH5)
RAC1_HUMAN
[Raw transfer]




GNP_A_3(1MH1)
RAC1_HUMAN
[Raw transfer]




GTP_A_3(1GWN)
RND3_MOUSE
[Raw transfer]




GNP_A_5(3EG5)
CDC42_MOUSE
[Raw transfer]




GNP_A_4(3SU8)
RAC1_HUMAN
[Raw transfer]




GCP_A_8(2ODB)
CDC42_HUMAN
[Raw transfer]




GTP_A_2(2WKQ)
RAC1_HUMAN
[Raw transfer]




GCP_A_4(2QME)
RAC3_HUMAN
[Raw transfer]




GTP_A_3(1M7B)
RND3_HUMAN
[Raw transfer]




GNP_C_5(3RYT)
RAC1_HUMAN
[Raw transfer]




GNP_B_5(3Q3J)
RND1_HUMAN
[Raw transfer]




GNP_A_7(1NF3)
CDC42_HUMAN
[Raw transfer]




GSP_A_5(2FJU)
RAC1_HUMAN
[Raw transfer]




GNP_C_7(3EG5)
CDC42_MOUSE
[Raw transfer]




GNP_B_8(1NF3)
CDC42_HUMAN
[Raw transfer]




GSP_A_3(3REG)
?
[Raw transfer]




GNP_F_12(1AM4)
CDC42_HUMAN
[Raw transfer]




GDP_A_4(2NGR)
CDC42_HUMAN
[Raw transfer]




GTP_B_3(2WMO)
CDC42_HUMAN
[Raw transfer]




GNP_E_11(1AM4)
CDC42_HUMAN
[Raw transfer]




GNP_A_7(2IC5)
RAC3_HUMAN
[Raw transfer]




GNP_D_10(1AM4)
CDC42_HUMAN
[Raw transfer]




GNP_A_5(2ATX)
RHOQ_HUMAN
[Raw transfer]




GDP_A_4(1GRN)
CDC42_HUMAN
[Raw transfer]




GCP_B_7(2QRZ)
CDC42_HUMAN
[Raw transfer]




GNP_B_5(3TH5)
RAC1_HUMAN
[Raw transfer]




GNP_D_5(1I4T)
RAC1_HUMAN
[Raw transfer]




GCP_A_6(2QRZ)
CDC42_HUMAN
[Raw transfer]




GDP_A_6(3CON)
RASN_HUMAN
[Raw transfer]




GDP_C_8(4ITR)
CDC42_HUMAN
[Raw transfer]




GDP_D_12(4ITR)
CDC42_HUMAN
[Raw transfer]




GDP_D_11(1HE1)
RAC1_HUMAN
[Raw transfer]




GDP_C_6(1HE1)
RAC1_HUMAN
[Raw transfer]




GDP_A_3(4DID)
CDC42_HUMAN
[Raw transfer]




GDP_A_5(3QBV)
CDC42_HUMAN
[Raw transfer]




GDP_C_6(3QBV)
CDC42_HUMAN
[Raw transfer]




GDP_A_5(1DOA)
CDC42_HUMAN
[Raw transfer]




GDP_A_5(1U8Z)
RALA_SAGOE
[Raw transfer]




GDP_A_4(1A4R)
CDC42_HUMAN
[Raw transfer]




GDP_B_13(2P2L)
RAC1_HUMAN
[Raw transfer]




GDP_A_4(1KAO)
RAP2A_HUMAN
[Raw transfer]




GDP_B_3(2WMN)
CDC42_HUMAN
[Raw transfer]




GDP_D_5(1I4L)
RAC1_HUMAN
[Raw transfer]




GDP_A_12(2P2L)
RAC1_HUMAN
[Raw transfer]




GDP_D_5(1I4D)
RAC1_HUMAN
[Raw transfer]




GDP_A_8(2G0N)
RAC3_HUMAN
[Raw transfer]




GDP_B_19(2C2H)
RAC3_HUMAN
[Raw transfer]




GDP_A_3(2C2H)
RAC3_HUMAN
[Raw transfer]




GDP_B_8(2IC5)
RAC3_HUMAN
[Raw transfer]




GDP_A_3(1Z2A)
RAB23_MOUSE
[Raw transfer]




GNH_B_5(1A4R)
CDC42_HUMAN
[Raw transfer]




GDP_C_14(2P2L)
RAC1_HUMAN
[Raw transfer]




GDP_A_4(1DS6)
RAC2_HUMAN
[Raw transfer]




GOL_B_5(2WM9)
CDC42_HUMAN
[Raw transfer]




GDP_B_2(2FV8)
RHOB_HUMAN
[Raw transfer]




GDP_A_5(2J0V)
RAC7_ARATH
[Raw transfer]




GDP_A_3(2Q3H)
RHOU_HUMAN
[Raw transfer]




GDP_A_2(2J1L)
RHOD_HUMAN
[Raw transfer]




GDP_B_6(1AN0)
CDC42_HUMAN
[Raw transfer]




GDP_A_5(1AN0)
CDC42_HUMAN
[Raw transfer]




AF3_A_5(1GRN)
CDC42_HUMAN
[Raw transfer]




AF3_A_5(2NGR)
CDC42_HUMAN
[Raw transfer]




AF3_C_7(1HE1)
RAC1_HUMAN
[Raw transfer]




AF3_D_12(1HE1)
RAC1_HUMAN
[Raw transfer]




36 PsiBlast_CBE 94.6799%-124 - C3 -1A4R 7.3 CDC42_HUMAN
11 PsiBlast_PDB 92.93100%-135 - C3 -1DOA 5.8 CDC42_HUMAN
4 PsiBlast_PDB 92.81100%-122 - C3 -3EG5 8.4 CDC42_MOUSE
29 PsiBlast_CBE 92.60100%-114 - C3 -1GRN 6.9 CDC42_HUMAN
12 PsiBlast_PDB 92.35100%-120 - C3 -2QRZ 7.3 CDC42_HUMAN
5 PsiBlast_PDB 92.28100%-112 - C3 -2ODB 8.8 CDC42_HUMAN
9 PsiBlast_PDB 92.27100%-118 - C3 -4DID 7.0 CDC42_HUMAN
25 PsiBlast_CBE 92.01100%-115 - C3 -2QRZ 6.5 CDC42_HUMAN
21 PsiBlast_CBE 92.01100%-122 - C3 -3EG5 8.6 CDC42_MOUSE
37 PsiBlast_CBE 91.6399%-116 - C3 -1A4R 7.0 CDC42_HUMAN
34 PsiBlast_CBE 91.5799%-121 - C3 -3QBV 7.5 CDC42_HUMAN
32 PsiBlast_CBE 91.53100%-131 - C3 -1AM4 5.8 CDC42_HUMAN
13 PsiBlast_PDB 91.49100%-117 - C3 -2WM9 2.8 CDC42_HUMAN
35 PsiBlast_CBE 91.4499%-120 - C3 -3QBV 5.4 CDC42_HUMAN
28 PsiBlast_CBE 91.38100%-114 - C3 -2NGR 7.8 CDC42_HUMAN
15 PsiBlast_PDB 91.32100%-118 - C3 -2WMO 5.8 CDC42_HUMAN
39 PsiBlast_CBE 91.1398%-115 - C3 -1NF3 8.7 CDC42_HUMAN
38 PsiBlast_CBE 91.0898%-117 - C3 -1NF3 8.7 CDC42_HUMAN
27 PsiBlast_CBE 90.93100%-125 - C3 -4ITR 6.8 CDC42_HUMAN
14 PsiBlast_PDB 90.62100%-119 - C3 -2WMN 4.6 CDC42_HUMAN
33 PsiBlast_CBE 90.45100%-130 - C3 -1AM4 6.1 CDC42_HUMAN
26 PsiBlast_CBE 90.42100%-120 - C3 -4ITR 6.8 CDC42_HUMAN
31 PsiBlast_CBE 89.79100%-130 - C3 -1AM4 6.2 CDC42_HUMAN
59 PsiBlast_CBE 89.3975%-117 - C3 -2G0N 6.9 RAC3_HUMAN
61 PsiBlast_CBE 88.5875%-115 - C3 -2IC5 8.5 RAC3_HUMAN
44 PsiBlast_CBE 87.6275%-123 - C3 -3SU8 8.4 RAC1_HUMAN
69 PsiBlast_CBE 87.4774%-120 - C3 -1DS6 6.7 RAC2_HUMAN
67 PsiBlast_CBE 87.3975%-122 - C3 -1HE1 7.2 RAC1_HUMAN
49 PsiBlast_CBE 87.2975%-119 - C3 -2QME 9.3 RAC3_HUMAN
68 PsiBlast_CBE 87.2275%-126 - C3 -1HE1 7.3 RAC1_HUMAN
58 PsiBlast_CBE 87.1275%-110 - C3 -2G0N - RAC3_HUMAN
60 PsiBlast_CBE 87.0875%-109 - C3 -2IC5 7.0 RAC3_HUMAN
65 PsiBlast_CBE 86.9375%-121 - C3 -1I4D 6.1 RAC1_HUMAN
62 PsiBlast_CBE 86.5375%-118 - C3 -2C2H 6.9 RAC3_HUMAN
72 PsiBlast_CBE 86.3475%-118 - C3 -2P2L 7.3 RAC1_HUMAN
17 PsiBlast_PDB 85.6675%-119 - C3 -3TH5 8.5 RAC1_HUMAN
66 PsiBlast_CBE 85.2775%-123 - C3 -3TH5 7.4 RAC1_HUMAN
73 PsiBlast_CBE 85.1575%-119 - C3 -2P2L 7.2 RAC1_HUMAN
18 PsiBlast_PDB 85.0975%-116 - C3 -2FJU 8.7 RAC1_HUMAN
86 HHSearch 84.8075%-124 - C3 -1MH1 8.3 RAC1_HUMAN
63 PsiBlast_CBE 84.7575%-112 - C3 -2C2H 6.9 RAC3_HUMAN
74 PsiBlast_CBE 83.0275%-114 - C3 -2P2L 7.4 RAC1_HUMAN
71 PsiBlast_CBE 82.8875%-118 - C3 -1I4T 7.0 RAC1_HUMAN
64 PsiBlast_CBE 82.7575%-116 - C3 -1I4L 5.8 RAC1_HUMAN
93 HHSearch 82.6473%-120 - C3 -2WKQ 9.7 RAC1_HUMAN
70 PsiBlast_CBE 82.4875%-112 - C3 -3RYT 8.4 RAC1_HUMAN
87 HHSearch 81.1772%-126 - C3 -2ATX 6.8 RHOQ_HUMAN
88 HHSearch 78.1959%-127 - C3 -2FV8 7.0 RHOB_HUMAN
40 PsiBlast_CBE 77.8899% -83 - C3 -1AN0 5.6 CDC42_HUMAN
94 HHSearch 77.1260%-139 - C3 -2J0V 7.1 RAC7_ARATH
41 PsiBlast_CBE 74.8999% -83 - C3 -1AN0 6.6 CDC42_HUMAN
108 HHSearch 73.9237%-141 - C3 -3CON 7.1 RASN_HUMAN
90 HHSearch 73.3749%-135 - C3 -3REG 8.5 ?
89 HHSearch 72.5063%-127 - C3 -2Q3H 6.3 RHOU_HUMAN
85 HHSearch 72.3744%-116 * C3 *1M7B 8.8 RND3_HUMAN
96 HHSearch 70.3645%-117 - C3 -1GWN 8.6 RND3_MOUSE
99 HHSearch 69.8849%-142 - C3 -2J1L 6.2 RHOD_HUMAN
95 HHSearch 68.3539%-112 - C3 -3Q3J 9.0 RND1_HUMAN
103 HHSearch 65.3135%-127 - C3 -1Z2A 5.5 RAB23_MOUSE
106 HHSearch 62.7135%-125 - C3 -1U8Z 6.9 RALA_SAGOE
107 HHSearch 61.5333%-126 - C3 -1KAO 7.2 RAP2A_HUMAN