@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00074_RNAS1_: (2014-08-21 )
MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UPA_B_7(11BA)
RNS_BOVIN
[Raw transfer]




UPA_A_6(11BA)
RNS_BOVIN
[Raw transfer]




U2P_B_4(3DJO)
RNS_BOVIN
[Raw transfer]




CPA_C_3(1R5C)
RNS_BOVIN
[Raw transfer]




C3P_A_3(3DJV)
RNS_BOVIN
[Raw transfer]




UA3_A_3(3DJP)
RNS_BOVIN
[Raw transfer]




U2G_K_11(11BG)
RNS_BOVIN
[Raw transfer]




U2P_A_3(3DJO)
RNS_BOVIN
[Raw transfer]




U2G_N_14(11BG)
RNS_BOVIN
[Raw transfer]




UDP_B_4(3DJQ)
RNS_BOVIN
[Raw transfer]




CPA_D_4(1R5C)
RNS_BOVIN
[Raw transfer]




UA3_B_4(3DJP)
RNS_BOVIN
[Raw transfer]




C5P_B_4(3DJX)
RNS_BOVIN
[Raw transfer]




UDP_A_3(3DJQ)
RNS_BOVIN
[Raw transfer]




C5P_A_3(3DJX)
RNS_BOVIN
[Raw transfer]




C3P_B_4(3DJV)
RNS_BOVIN
[Raw transfer]




GOL_A_7(3MWQ)
RNAS1_BOVIN
[Raw transfer]




GOL_A_5(2P7S)
AMPS2_RANPI
[Raw transfer]




GOL_A_13(2E0O)
RNAS1_HUMAN
[Raw transfer]




U2G_M_13(11BG)
RNS_BOVIN
[Raw transfer]




12 PsiBlast_PDB 92.6996% -89 - C8 -2E0O 2.1 RNAS1_HUMAN
68 HHSearch 88.4169% -90 - C8 -3MWQ 2.0 RNAS1_BOVIN
33 PsiBlast_CBE 88.3072% -91 - C8 -3DJV 3.8 RNS_BOVIN
41 PsiBlast_CBE 88.1872% -96 - C8 -1R5C 6.9 RNS_BOVIN
31 PsiBlast_CBE 88.0072% -91 - C8 -3DJX 4.1 RNS_BOVIN
35 PsiBlast_CBE 87.9772% -92 - C8 -3DJQ 3.4 RNS_BOVIN
37 PsiBlast_CBE 87.8072% -92 - C8 -3DJP 3.0 RNS_BOVIN
39 PsiBlast_CBE 87.5372% -91 - C8 -3DJO 4.2 RNS_BOVIN
49 PsiBlast_CBE 87.4072% -96 - C8 -11BA 7.4 RNS_BOVIN
40 PsiBlast_CBE 86.7172% -95 - C8 -1R5C 6.5 RNS_BOVIN
48 PsiBlast_CBE 86.2172% -99 - C8 -11BA 6.5 RNS_BOVIN
38 PsiBlast_CBE 86.1472% -92 - C8 -3DJO 3.5 RNS_BOVIN
30 PsiBlast_CBE 85.8772% -85 - C8 -3DJX 4.2 RNS_BOVIN
32 PsiBlast_CBE 85.6972% -88 - C8 -3DJV 3.3 RNS_BOVIN
46 PsiBlast_CBE 85.6772% -93 - C8 -11BG 4.7 RNS_BOVIN
47 PsiBlast_CBE 85.6372% -88 - C8 -11BG 5.0 RNS_BOVIN
36 PsiBlast_CBE 85.6072% -88 - C8 -3DJP 3.9 RNS_BOVIN
34 PsiBlast_CBE 85.0072% -86 - C8 -3DJQ 3.4 RNS_BOVIN
79 HHSearch 60.4131% -79 - C8 -2P7S 2.4 AMPS2_RANPI