@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_CEL2A_: (2014-08-22 )
MIRALLLSTLVAGALSCGLPANLPQLPRVVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIANN

Atome Classification :

(15 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_A_1(1GVK)
CELA1_PIG
[Raw transfer]

-

INH_A_2(3BG8)

[Raw transfer]




FR1_N_4(1MMJ)
CELA1_PIG
[Raw transfer]




616_A_3(1HV7)
CELA1_PIG
[Raw transfer]




GOL_A_13(1L1G)
CELA1_PIG
[Raw transfer]




1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]




681_A_2(1FZZ)
CELA1_PIG
[Raw transfer]




1NB_B_2(1BRU)
CEL2A_PIG
[Raw transfer]




BEN_B_2(2OQ5)
TM11E_HUMAN
[Raw transfer]




ABV_U_3(3MHW)
?
[Raw transfer]




CHAIN_L_2(2WPH)
?
[Raw transfer]

-

XE_A_12(1L1G)
CELA1_PIG
[Raw transfer]




XE_A_4(1C1M)
CELA1_PIG
[Raw transfer]




XE_A_4(2A7C)
CELA1_PIG
[Raw transfer]




XE_A_(1L0Z)
CELA1_PIG
[Raw transfer]




XE_A_7(1UO6)
CELA1_PIG
[Raw transfer]




CHAIN_E_5(2F9N)
TRYB1_HUMAN
[Raw transfer]

-

31 HHSearch 99.39100%-130 - C1 -1BRU 3.1 CEL2A_PIG
5 PsiBlast_PDB 84.5758%-127 - C1 -1C1M 2.8 CELA1_PIG
13 PsiBlast_PDB 84.2358%-123 - C1 -1MMJ 5.0 CELA1_PIG
7 PsiBlast_PDB 83.5058%-123 - C1 -1FZZ 4.9 CELA1_PIG
32 HHSearch 83.3559%-119 - C1 -1GVK Error CELA1_PIG
6 PsiBlast_PDB 83.1058%-119 - C1 -1HV7 3.5 CELA1_PIG
18 PsiBlast_PDB 82.9658%-121 - C1 -2A7C 2.8 CELA1_PIG
15 PsiBlast_PDB 82.9658%-120 - C1 -1UO6 2.8 CELA1_PIG
9 PsiBlast_PDB 82.6058%-122 - C1 -1L0Z 2.8 CELA1_PIG
10 PsiBlast_PDB 82.1958%-118 - C1 -1L1G 2.8 CELA1_PIG
40 HHSearch 70.7535%-113 - C1 -3MHW 2.6 ?
51 HHSearch 68.7338%-122 - C1 -2F9N 3.0 TRYB1_HUMAN
52 HHSearch 67.6237%-113 - C1 -2WPH 3.8 ?
55 HHSearch 67.4937%-119 * C1 *2OQ5 2.7 TM11E_HUMAN
45 HHSearch 61.5836%-110 - C1 -3BG8 3.9