@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_FA10_R: (2014-08-23 )
MESPVRLSLLYVVLASLLLPGRSVFINRERANNVLQRIRRANSFFEEIKKGNLERECVEEICSFEEAREVFEDNEKTTEFWNKYEDGDQCESSPCQNQGECRDGLGSYTCTCTEGFEGKNCELFVRKLCSLDNGDCDQFCREEQNSVVCSCAKGYFLGNDGKSCLSTAPFPCGKTNKGRAKRSVALNTSNSEPDPEDLMPDADILYPTESPSELLNLNKTEPEANSDDVIRIVGGQECKRGECPWQALLFSDEETDGFCGGTILNEFYILTAAHCLHQAKRFKVRVGDLNTEQEDGGEMVHEVDMIIKHNKFQRDTYDFDIAMLRLKTPITFRENVAPACLPQKDWAEATLMTQKTGIVSGFGRTHEKGRQSKVLKMMEVPYVDRNTCRLSTSFSITQNMFCAGYDAKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKARVGPTSETPRLTHPPY

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GSJ_A_3(2J4I)

[Raw transfer]




S00_H_5(3RM2)
?
[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




GSI_A_5(2VH0)

[Raw transfer]




GSK_A_4(2CJI)
?
[Raw transfer]




443_A_3(3KL6)

[Raw transfer]




931_A_3(2Y81)
?
[Raw transfer]




G15_A_3(2J94)
?
[Raw transfer]




A7I_B_4(4A7I)
?
[Raw transfer]




XMG_A_4(1IQI)

[Raw transfer]




GSV_A_3(2VH6)
?
[Raw transfer]




XMC_A_4(1IQN)
?
[Raw transfer]




461_A_3(2WYG)
FA10_HUMAN
[Raw transfer]




IIE_B_4(2BQW)
?
[Raw transfer]




701_A_3(2UWO)
FA10_HUMAN
[Raw transfer]




IMA_B_4(1LPG)
?
[Raw transfer]




898_A_3(2WYJ)
?
[Raw transfer]




GS5_A_3(2J38)
?
[Raw transfer]




GSX_A_3(2J95)

[Raw transfer]




XMI_A_4(1IQK)

[Raw transfer]




RPR_A_4(1EZQ)
?
[Raw transfer]




XMK_A_4(1IQM)

[Raw transfer]




GSQ_A_3(2J2U)

[Raw transfer]




RTR_A_4(1NFY)
?
[Raw transfer]




GS6_A_3(2J34)

[Raw transfer]




RRP_A_4(1NFU)

[Raw transfer]




XMH_A_4(1IQJ)
?
[Raw transfer]




PR2_A_4(1F0S)
?
[Raw transfer]




XMJ_A_4(1IQL)
?
[Raw transfer]




895_A_3(2UWL)
?
[Raw transfer]




RDR_A_4(1NFX)

[Raw transfer]




IIB_B_4(2BQ6)
?
[Raw transfer]




RRR_A_4(1NFW)
?
[Raw transfer]




4PP_C_4(1XKA)
?
[Raw transfer]




CBB_B_4(1LPK)
?
[Raw transfer]




4PP_C_8(1XKB)
?
[Raw transfer]




815_A_4(1F0R)

[Raw transfer]




4PP_D_9(1XKB)
?
[Raw transfer]




IID_A_3(2BQ7)
?
[Raw transfer]




CMI_B_4(1LQD)
?
[Raw transfer]




0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]




CMB_B_4(1LPZ)
?
[Raw transfer]




INH_A_2(3BG8)

[Raw transfer]




EDO_A_4(3KL6)

[Raw transfer]




CHAIN_L_2(2WPH)
?
[Raw transfer]

-

CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]

-

CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]




38 PsiBlast_CBE 91.8682%-105 - C4 -2UWO 7.1 FA10_HUMAN
34 PsiBlast_CBE 91.1482%-110 - C4 -2WYG 7.5 FA10_HUMAN
36 PsiBlast_CBE 90.7782%-105 - C4 -2VH0 8.3
19 PsiBlast_PDB 90.6182%-102 - C4 -2CJI 6.9 ?
41 PsiBlast_CBE 90.4682%-103 - C4 -2J94 6.7 ?
40 PsiBlast_CBE 90.3482%-105 - C4 -2J95 6.8
16 PsiBlast_PDB 90.3282%-104 - C4 -1LQD 8.2 ?
20 PsiBlast_PDB 90.2482%-110 - C4 -2J2U 6.4
13 PsiBlast_PDB 90.1982%-105 - C4 -1LPG 7.7 ?
39 PsiBlast_CBE 90.1682%-105 - C4 -2UWL 6.1 ?
55 PsiBlast_CBE 90.1386%-104 - C4 -1XKA 6.5 ?
43 PsiBlast_CBE 90.0882%-105 - C4 -2J38 6.7 ?
42 PsiBlast_CBE 90.0882%-106 - C4 -2J4I 7.1
6 PsiBlast_PDB 90.0882%-104 - C4 -1F0R 6.7
44 PsiBlast_CBE 90.0682%-102 - C4 -2J34 6.8
3 PsiBlast_PDB 90.0583%-100 - C4 -2BQ7 7.7 ?
15 PsiBlast_PDB 89.9382%-103 - C4 -1LPZ 9.1 ?
12 PsiBlast_PDB 89.8582%-105 - C4 -1NFY 7.0 ?
29 PsiBlast_CBE 89.8182%-104 - C4 -2Y81 8.6 ?
45 PsiBlast_CBE 89.7984%-103 - C4 -3KL6 8.1
5 PsiBlast_PDB 89.6882%-107 - C4 -1EZQ 8.9 ?
57 PsiBlast_CBE 89.4786%-104 - C4 -1IQM 7.7
54 PsiBlast_CBE 89.4186% -99 - C4 -1XKB 6.5 ?
56 PsiBlast_CBE 89.3486% -99 - C4 -1IQN 8.4 ?
27 PsiBlast_CBE 89.2782% -98 - C4 -4A7I 7.9 ?
14 PsiBlast_PDB 89.2782%-101 - C4 -1LPK 8.2 ?
9 PsiBlast_PDB 89.2382%-103 - C4 -1NFU 6.5
53 PsiBlast_CBE 89.0786% -99 - C4 -1XKB 6.6 ?
7 PsiBlast_PDB 89.0482% -98 - C4 -1F0S 6.5 ?
33 PsiBlast_CBE 89.0182%-109 - C4 -2WYJ 7.7 ?
35 PsiBlast_CBE 88.9282%-101 - C4 -2VH6 8.3 ?
11 PsiBlast_PDB 88.8782%-100 - C4 -1NFX 8.0
10 PsiBlast_PDB 88.8682% -99 - C4 -1NFW 7.4 ?
4 PsiBlast_PDB 88.6883%-103 - C4 -2BQW 8.5 ?
2 PsiBlast_PDB 88.4783% -97 - C4 -2BQ6 9.2 ?
59 PsiBlast_CBE 88.0286%-100 - C4 -1IQK 8.4
61 PsiBlast_CBE 87.6086%-101 - C4 -1IQI 7.2
58 PsiBlast_CBE 86.5786% -98 - C4 -1IQL 6.5 ?
60 PsiBlast_CBE 86.3586%-100 - C4 -1IQJ 7.5 ?
88 HHSearch 78.1659% -86 - C4 -1FXY 4.1 TRY1_HUMAN
78 HHSearch 77.0948%-100 - C4 -2WPH 5.7 ?
77 HHSearch 76.7437% -91 - C4 -4JZE 7.3 ?
86 HHSearch 76.4440% -95 - C4 -3RM2 5.4 ?
79 HHSearch 76.3339% -94 - C4 -3NXP - THRB_HUMAN
80 HHSearch 72.1536% -96 - C4 -1AUT 1.8 PROC_HUMAN
96 HHSearch 68.7834% -92 - C4 -3BG8 4.0