@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_THRB_B: (2014-08-23 )
ANKGFLEEVRKGNLERECLEEPCSREEAFEALESLSATDAFWAKYTACESARNPREKLNECLEGNCAEGVGMNYRGNVSVTRSGIECQLWRSRYPHKPEINSTTHPGADLRENFCRNPDGSITGPWCYTTSPTLRREECSVPVCGQDRVTVEVIPRSGGSTTSQSPLLETCVPDRGREYRGRLAVTTSGSRCLAWSSEQAKALSKDQDFNPAVPLAENFCRNPDGDEEGAWCYVADQPGDFEYCDLNYCEEPVDGDLGDRLGEDPDPDAAIEGRTSEDHFQPFFNEKTFGAGEADCGLRPLFEKKQVQDQTEKELFESYIEGRIVEGQDAEVGLSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRYERKVEKISMLDKIYIHPRYNWKENLDRDIALLKLKRPIELSDYIHPVCLPDKQTAAKLLHAGFKGRVTGWGNRRETWTTSVAEVQPSVLQVVNLPLVERPVCKASTRIRITDNMFCAGYKPGEGKRGDACEGDSGGPFVMKSPYNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDRLGS

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACE_G_12(1BBR)
?
[Raw transfer]



MIT_H_3(1ETR)
?
[Raw transfer]



MID_H_3(1ETS)
?
[Raw transfer]



130_H_5(1GJ5)

[Raw transfer]



S00_H_5(3RM2)
?
[Raw transfer]



UNB_A_4(2BDY)
?
[Raw transfer]



UNB_A_4(2BDY)
?
[Raw transfer]



0ZG_H_3(1ETT)
?
[Raw transfer]



T15_A_3(3C1K)
?
[Raw transfer]



062_A_3(1ZRB)

[Raw transfer]



501_A_3(1ZGV)
?
[Raw transfer]



165_H_6(1SB1)
?
[Raw transfer]



00P_A_5(1D9I)
?
[Raw transfer]



132_H_5(1GJ4)
?
[Raw transfer]



2FN_H_10(4N3L)
?
[Raw transfer]



382_C_3(1ZGI)
?
[Raw transfer]



00R_A_5(1D6W)

[Raw transfer]



0G6_B_7(2A1D)
?
[Raw transfer]



0ZJ_D_11(1NU9)
?
[Raw transfer]



0G6_D_11(4LZ4)
?
[Raw transfer]



T76_A_3(1NT1)

[Raw transfer]



0G6_B_8(4LZ4)
?
[Raw transfer]



177_A_3(1TA6)
?
[Raw transfer]



0G6_H_6(3DD2)
?
[Raw transfer]



0G6_L_7(4LZ1)
?
[Raw transfer]



0G6_F_8(2A1D)
?
[Raw transfer]



L17_A_3(1Z71)

[Raw transfer]



170_A_3(1SL3)
?
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



CHAIN_H_2(1NT1)

[Raw transfer]
-
0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]



P6G_H_12(3DD2)
?
[Raw transfer]



2OJ_H_10(4NZE)
?
[Raw transfer]



CHAIN_I_3(1GJ4)
?
[Raw transfer]
-
CHAIN_I_3(1GJ5)

[Raw transfer]
-
INH_A_2(3BG8)

[Raw transfer]



BBS_B_3(1EOL)
?
[Raw transfer]



BBS_B_3(1EOJ)
?
[Raw transfer]



CHAIN_E_5(4LZ4)
?
[Raw transfer]
-
CHAIN_F_6(1A0H)
?
[Raw transfer]
-
CHAIN_L_2(2WPH)
?
[Raw transfer]
-
CHAIN_C_3(1A0H)
?
[Raw transfer]
-
CHAIN_F_6(4LZ4)
?
[Raw transfer]
-
CHAIN_F_3(1YCP)
?
[Raw transfer]
-
CHAIN_D_3(4LZ1)
?
[Raw transfer]
-
CHAIN_B_2(1EOL)
?
[Raw transfer]
-
CHAIN_I_10(1BBR)
?
[Raw transfer]
-
CHAIN_B_2(3C1K)
?
[Raw transfer]
-
CHAIN_B_2(1TA6)
?
[Raw transfer]
-
CHAIN_B_2(1EOJ)
?
[Raw transfer]
-
CHAIN_C_3(1DM4)
?
[Raw transfer]
-
CHAIN_I_3(1VIT)

[Raw transfer]
-
CHAIN_B_2(1TA2)
?
[Raw transfer]
-
CHAIN_B_2(1ZGV)
?
[Raw transfer]
-
CHAIN_B_2(2BDY)
?
[Raw transfer]
-
CHAIN_B_2(1ZRB)

[Raw transfer]
-
CHAIN_I_2(1D6W)

[Raw transfer]
-
CHAIN_B_2(1SL3)
?
[Raw transfer]
-
CHAIN_B_2(1ZGI)
?
[Raw transfer]
-
CHAIN_B_2(1Z71)

[Raw transfer]
-
CHAIN_I_2(1D9I)
?
[Raw transfer]
-
CHAIN_I_3(7KME)

[Raw transfer]
-
CHAIN_G_7(1BBR)
?
[Raw transfer]
-
CHAIN_B_2(1NM6)
?
[Raw transfer]
-
CHAIN_I_3(3RM2)
?
[Raw transfer]
-
CHAIN_G_7(1UCY)
?
[Raw transfer]
-
CHAIN_I_3(4NZE)
?
[Raw transfer]
-
CHAIN_I_3(4N3L)
?
[Raw transfer]
-
CHAIN_I_3(1SB1)
?
[Raw transfer]
-
ACE_I_13(1BBR)
?
[Raw transfer]



CHAIN_I_10(1UCY)
?
[Raw transfer]
-
CH2_C_9(1A0H)
?
[Raw transfer]



CH2_F_10(1A0H)
?
[Raw transfer]
32 PsiBlast_CBE 94.1586%-100 - C4 -1EOJ 12.2 ?
34 PsiBlast_CBE 93.7486% -98 - C4 -1ZRB 9.0
31 PsiBlast_CBE 93.6186%-100 - C4 -1EOL 10.2 ?
39 PsiBlast_CBE 93.5886% -97 - C4 -1TA2 7.2 ?
35 PsiBlast_CBE 93.4186% -98 - C4 -1ZGV 7.9 ?
33 PsiBlast_CBE 93.1686% -98 - C4 -3C1K 8.5 ?
30 PsiBlast_CBE 93.1086% -95 - C4 -1D9I 6.5 ?
42 PsiBlast_CBE 93.0986% -97 - C4 -1NM6 7.3 ?
36 PsiBlast_CBE 93.0786% -96 - C4 -1ZGI 8.2 ?
40 PsiBlast_CBE 93.0386% -97 - C4 -1SL3 9.7 ?
37 PsiBlast_CBE 92.9986% -95 - C4 -1Z71 9.9
43 PsiBlast_CBE 92.8186% -99 - C4 -1D6W 6.4
77 HHSearch 92.5586% -93 - C4 -2BDY 8.9 ?
38 PsiBlast_CBE 92.4986% -99 - C4 -1TA6 9.4 ?
21 PsiBlast_CBE 92.3686% -93 - C4 -1NU9 6.8 ?
41 PsiBlast_CBE 92.1686% -99 - C4 -1NT1 9.6
11 PsiBlast_PDB 89.67100%-115 - C4 -1ETT 7.1 ?
27 PsiBlast_CBE 89.57100%-111 - C4 -1BBR 7.7 ?
10 PsiBlast_PDB 89.11100%-112 - C4 -1ETS 9.0 ?
8 PsiBlast_PDB 88.59100%-116 - C4 -1BBR 7.8 ?
9 PsiBlast_PDB 88.48100%-119 - C4 -1ETR 7.9 ?
16 PsiBlast_PDB 88.43100%-109 - C4 -2A1D 6.6 ?
15 PsiBlast_PDB 88.15100%-111 - C4 -1A0H 5.2 ?
25 PsiBlast_CBE 88.13100%-110 - C4 -2A1D 6.2 ?
12 PsiBlast_PDB 88.06100%-108 - C4 -1UCY 9.7 ?
28 PsiBlast_CBE 88.03100%-110 - C4 -1A0H 4.7 ?
26 PsiBlast_CBE 87.54100%-108 - C4 -1UCY 10.8 ?
14 PsiBlast_PDB 87.07100%-115 - C4 -1YCP 5.8 ?
13 PsiBlast_PDB 86.76100%-104 - C4 -1VIT 6.5
52 PsiBlast_CBE 85.7787%-111 - C4 -1SB1 7.4 ?
58 PsiBlast_CBE 85.7387%-110 - C4 -4NZE 7.0 ?
80 HHSearch 85.5788%-111 - C4 -3RM2 9.5 ?
50 PsiBlast_CBE 85.5787%-108 - C4 -3DD2 6.4 ?
59 PsiBlast_CBE 85.5587%-112 - C4 -4N3L 8.4 ?
53 PsiBlast_CBE 85.4887%-108 - C4 -1GJ5 5.7
54 PsiBlast_CBE 85.2787%-109 - C4 -1GJ4 5.1 ?
55 PsiBlast_CBE 84.9887%-107 - C4 -7KME 7.6
62 PsiBlast_CBE 84.9787%-110 - C4 -4LZ1 11.6 ?
60 PsiBlast_CBE 84.8487%-108 - C4 -4LZ4 9.8 ?
61 PsiBlast_CBE 84.6387%-109 - C4 -4LZ4 10.9 ?
49 PsiBlast_CBE 83.5687%-105 - C4 -1DM4 5.0 ?
90 HHSearch 65.5240%-102 - C4 -2WPH 4.8 ?
102 HHSearch 64.2440%-110 - C4 -1AUT 4.9 PROC_HUMAN
92 HHSearch 62.7536% -95 - C4 -4JZE 6.4 ?
96 HHSearch 61.8637% -99 - C4 -3BG8 4.1