@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_THRB_H: (2014-08-23 )
MAHVRGLQLPGCLALAALCSLVHSQHVFLAPQQARSLLQRVRRANTFLEEVRKGNLERECVEETCSYEEAFEALESSTATDVFWAKYTACETARTPRDKLAACLEGNCAEGLGTNYRGHVNITRSGIECQLWRSRYPHKPEINSTTHPGADLQENFCRNPDSSTTGPWCYTTDPTVRRQECSIPVCGQDQVTVAMTPRSEGSSVNLSPPLEQCVPDRGQQYQGRLAVTTHGLPCLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGVWCYVAGKPGDFGYCDLNYCEEAVEEETGDGLDEDSDRAIEGRTATSEYQTFFNPRTFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQFGE

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1Z0_A_3(1DOJ)
?
[Raw transfer]



T15_A_3(3C1K)
?
[Raw transfer]



S00_H_5(3RM2)
?
[Raw transfer]



GAH_C_3(1XM1)
?
[Raw transfer]



UNB_A_4(2BDY)
?
[Raw transfer]



062_A_3(1ZRB)

[Raw transfer]



0NW_H_8(4E7R)
?
[Raw transfer]



00P_A_5(1D9I)
?
[Raw transfer]



0G6_H_22(4CH8)
?
[Raw transfer]



GOL_D_12(4CH2)
?
[Raw transfer]



0G6_B_8(4CH2)
?
[Raw transfer]



BLI_B_2(1JWT)

[Raw transfer]



0G6_F_19(4CH8)
?
[Raw transfer]



0G6_D_11(4LZ4)
?
[Raw transfer]



0G6_B_14(4CH8)
?
[Raw transfer]



501_A_3(1ZGV)
?
[Raw transfer]



0G6_D_17(4CH8)
?
[Raw transfer]



2FN_H_10(4N3L)
?
[Raw transfer]



00R_A_5(1D6W)

[Raw transfer]



0ZJ_D_11(1NU9)
?
[Raw transfer]



177_A_3(1TA6)
?
[Raw transfer]



0ZJ_A_5(1NU9)
?
[Raw transfer]



0G6_H_5(4DIH)
?
[Raw transfer]



GOL_B_15(4CH8)
?
[Raw transfer]



0G6_L_7(4LZ1)
?
[Raw transfer]



382_C_3(1ZGI)
?
[Raw transfer]



0G6_B_8(4LZ4)
?
[Raw transfer]



T76_A_3(1NT1)

[Raw transfer]



0G6_H_5(4I7Y)
?
[Raw transfer]



0G6_H_5(4DII)
?
[Raw transfer]



0G6_D_11(4CH2)
?
[Raw transfer]



L17_A_3(1Z71)

[Raw transfer]



0NW_G_15(4E7R)
?
[Raw transfer]



1NK_H_3(4JZE)
?
[Raw transfer]



170_A_3(1SL3)
?
[Raw transfer]



CHAIN_H_2(1NT1)

[Raw transfer]
-
0G6_C_3(1AUT)
PROC_HUMAN
[Raw transfer]



2OJ_H_10(4NZE)
?
[Raw transfer]



CHAIN_I_4(3VXF)
?
[Raw transfer]
-
INH_A_2(3BG8)

[Raw transfer]



BBS_B_3(1EOL)
?
[Raw transfer]



BBS_B_3(1EOJ)
?
[Raw transfer]



CHAIN_F_6(4LZ4)
?
[Raw transfer]
-
CHAIN_E_5(4LZ4)
?
[Raw transfer]
-
CHAIN_L_2(2WPH)
?
[Raw transfer]
-
CHAIN_D_3(4LZ1)
?
[Raw transfer]
-
CHAIN_D_3(4DII)
?
[Raw transfer]
-
CHAIN_D_3(4DIH)
?
[Raw transfer]
-
CHAIN_C_3(1DM4)
?
[Raw transfer]
-
CHAIN_M_5(4BOH)
?
[Raw transfer]
-
CHAIN_B_2(1EOL)
?
[Raw transfer]
-
CHAIN_B_2(1EOJ)
?
[Raw transfer]
-
CHAIN_B_2(1ZGV)
?
[Raw transfer]
-
CHAIN_B_2(3C1K)
?
[Raw transfer]
-
CHAIN_B_2(1TA6)
?
[Raw transfer]
-
CHAIN_B_2(1TA2)
?
[Raw transfer]
-
CHAIN_B_2(1SL3)
?
[Raw transfer]
-
CHAIN_B_2(1ZGI)
?
[Raw transfer]
-
CHAIN_B_2(1ZRB)

[Raw transfer]
-
CHAIN_I_2(1D6W)

[Raw transfer]
-
CHAIN_I_3(7KME)

[Raw transfer]
-
CHAIN_B_2(1NM6)
?
[Raw transfer]
-
CHAIN_B_2(1Z71)

[Raw transfer]
-
CHAIN_I_3(3RM2)
?
[Raw transfer]
-
CHAIN_I_5(4E7R)
?
[Raw transfer]
-
CHAIN_J_6(4E7R)
?
[Raw transfer]
-
CHAIN_I_3(4NZE)
?
[Raw transfer]
-
CHAIN_I_3(4N3L)
?
[Raw transfer]
-
5 PsiBlast_PDB 90.75100% -88 - C5 -1DOJ 7.2 ?
12 PsiBlast_PDB 89.5899% -99 - C5 -1EOJ 12.2 ?
23 PsiBlast_CBE 89.25100% -96 - C5 -1ZGV 7.9 ?
16 PsiBlast_PDB 89.21100% -95 - C5 -1TA2 7.2 ?
13 PsiBlast_PDB 89.1099% -98 - C5 -1EOL 10.2 ?
14 PsiBlast_PDB 89.03100% -95 - C5 -1NM6 7.3 ?
20 PsiBlast_PDB 88.88100% -96 - C5 -1ZRB 9.0
6 PsiBlast_PDB 88.82100% -93 - C5 -1XM1 9.2 ?
22 PsiBlast_CBE 88.80100% -96 - C5 -3C1K 8.5 ?
3 PsiBlast_PDB 88.75100% -91 - C5 -1JWT 6.0
24 PsiBlast_CBE 88.65100% -93 - C5 -1ZGI 8.2 ?
19 PsiBlast_PDB 88.58100% -92 - C5 -1Z71 9.9
21 PsiBlast_CBE 88.48100% -90 - C5 -1NU9 6.8 ?
10 PsiBlast_PDB 88.39100% -92 - C5 -2BDY 8.9 ?
25 PsiBlast_CBE 88.38100% -97 - C5 -1D6W 6.4
18 PsiBlast_PDB 88.30100% -93 - C5 -1SL3 9.7 ?
17 PsiBlast_PDB 88.28100% -97 - C5 -1TA6 9.4 ?
11 PsiBlast_PDB 88.18100% -92 - C5 -1D9I 6.5 ?
7 PsiBlast_PDB 88.01100% -91 - C5 -1NU9 6.0 ?
15 PsiBlast_PDB 88.00100% -97 - C5 -1NT1 9.6
52 PsiBlast_CBE 83.68100%-101 - C5 -4BOH 7.3 ?
60 PsiBlast_CBE 83.58100%-106 - C5 -3VXF Error ?
33 PsiBlast_CBE 83.47100%-107 - C5 -4NZE 7.0 ?
44 PsiBlast_CBE 83.35100%-112 - C5 -4DII 9.7 ?
35 PsiBlast_CBE 83.27100%-105 - C5 -4LZ4 10.7 ?
76 HHSearch 83.16100%-107 - C5 -3RM2 9.5 ?
36 PsiBlast_CBE 83.07100%-105 - C5 -4LZ4 11.2 ?
45 PsiBlast_CBE 82.73100%-111 - C5 -4DIH 8.9 ?
30 PsiBlast_CBE 82.57100%-104 - C5 -7KME 7.4
48 PsiBlast_CBE 82.53100%-107 - C5 -4CH8 4.9 ?
49 PsiBlast_CBE 82.51100%-111 - C5 -4CH8 5.2 ?
50 PsiBlast_CBE 82.45100%-105 - C5 -4CH2 6.6 ?
34 PsiBlast_CBE 82.43100%-108 - C5 -4N3L 8.4 ?
46 PsiBlast_CBE 82.32100%-102 - C5 -4CH8 5.3 ?
41 PsiBlast_CBE 82.30100%-105 - C5 -4E7R 9.7 ?
51 PsiBlast_CBE 82.29100%-101 - C5 -4CH2 6.6 ?
38 PsiBlast_CBE 82.22100%-106 - C5 -4I7Y 6.2 ?
47 PsiBlast_CBE 82.10100%-107 - C5 -4CH8 4.9 ?
40 PsiBlast_CBE 81.93100%-105 - C5 -4E7R 9.4 ?
37 PsiBlast_CBE 81.66100%-107 - C5 -4LZ1 11.7 ?
29 PsiBlast_CBE 81.4199%-102 - C5 -1DM4 4.9 ?
98 HHSearch 62.8541%-103 - C5 -1AUT 4.9 PROC_HUMAN
89 HHSearch 61.6438% -95 - C5 -2WPH 4.8 ?
90 HHSearch 60.6936% -91 - C5 -4JZE 6.4 ?
94 HHSearch 59.5236% -93 - C5 -3BG8 4.1