@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_THRB_M: (2014-08-23 )
MSHVRGLGLPGCLALAALVSLVHSQHVFLAPQQALSLLQRVRRANSGFLEELRKGNLERECVEEQCSYEEAFEALESPQDTDVFWAKYTVCDSVRKPRETFMDCLEGRCAMDLGVNYLGTVNVTHTGIQCQLWRSRYPHKPEINSTTHPGADLKENFCRNPDSSTTGPWCYTTDPTVRREECSVPVCGQEGRTTVVMTPRSGGSKDNLSPPLGQCLTERGRLYQGNLAVTTLGSPCLPWNSLPAKTLSKYQDFDPEVKLVENFCRNPDWDEEGAWCYVAGQPGDFEYCNLNYCEEAVGEENYDVDESIAGRTTDAEFHTFFNEKTFGLGEADCGLRPLFEKKSLKDTTEKELLDSYIDGRIVEGWDAEKGIAPWQVMLFRKSPQELLCGASLISDRWVLTAAHCILYPPWDKNFTENDLLVRIGKHSRTRYERNVEKISMLEKIYVHPRYNWRENLDRDIALLKLKKPVPFSDYIHPVCLPDKQTVTSLLRAGYKGRVTGWGNLRETWTTNINEIQPSVLQVVNLPIVERPVCKASTRIRITDNMFCAGFKVNDTKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRKGKYGFYTHVFRLKRWIQKVIDQFG

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

T15_A_3(3C1K)
?
[Raw transfer]




GAH_C_3(1XM1)
?
[Raw transfer]




1Z0_A_3(1DOJ)
?
[Raw transfer]




S00_H_5(3RM2)
?
[Raw transfer]




UNB_A_4(2BDY)
?
[Raw transfer]




UNB_A_4(2BDY)
?
[Raw transfer]




00P_A_5(1D9I)
?
[Raw transfer]




062_A_3(1ZRB)

[Raw transfer]




0NW_H_8(4E7R)
?
[Raw transfer]




0G6_D_17(4CH8)
?
[Raw transfer]




0G6_B_14(4CH8)
?
[Raw transfer]




0G6_H_22(4CH8)
?
[Raw transfer]




BLI_B_2(1JWT)

[Raw transfer]




00R_A_5(1D6W)

[Raw transfer]




0G6_B_8(4LZ4)
?
[Raw transfer]




GOL_D_12(4CH2)
?
[Raw transfer]




2FN_H_10(4N3L)
?
[Raw transfer]




0G6_D_11(4LZ4)
?
[Raw transfer]




0G6_F_19(4CH8)
?
[Raw transfer]




0ZJ_D_11(1NU9)
?
[Raw transfer]




382_C_3(1ZGI)
?
[Raw transfer]




501_A_3(1ZGV)
?
[Raw transfer]




T76_A_3(1NT1)

[Raw transfer]




0G6_H_5(4DIH)
?
[Raw transfer]




0G6_L_7(4LZ1)
?
[Raw transfer]




177_A_3(1TA6)
?
[Raw transfer]




0G6_D_11(4CH2)
?
[Raw transfer]




0ZJ_A_5(1NU9)
?
[Raw transfer]




GOL_B_15(4CH8)
?
[Raw transfer]




0G6_H_5(4DII)
?
[Raw transfer]




0G6_H_5(4I7Y)
?
[Raw transfer]




L17_A_3(1Z71)

[Raw transfer]




1NK_H_3(4JZE)
?
[Raw transfer]




170_A_3(1SL3)
?
[Raw transfer]




0NW_G_15(4E7R)
?
[Raw transfer]




CHAIN_H_2(1NT1)

[Raw transfer]

-

2OJ_H_10(4NZE)
?
[Raw transfer]




BBS_B_3(1EOL)
?
[Raw transfer]




BBS_B_3(1EOJ)
?
[Raw transfer]




CHAIN_E_5(4LZ4)
?
[Raw transfer]

-

CHAIN_F_6(4LZ4)
?
[Raw transfer]

-

CHAIN_L_2(2WPH)
?
[Raw transfer]

-

CHAIN_C_3(2OD3)
?
[Raw transfer]

-

CHAIN_D_3(4LZ1)
?
[Raw transfer]

-

CHAIN_B_2(1EOL)
?
[Raw transfer]

-

CHAIN_D_3(4DII)
?
[Raw transfer]

-

CHAIN_D_3(4DIH)
?
[Raw transfer]

-

CHAIN_C_3(1DM4)
?
[Raw transfer]

-

CHAIN_B_2(3C1K)
?
[Raw transfer]

-

CHAIN_B_2(1TA6)
?
[Raw transfer]

-

CHAIN_B_2(1EOJ)
?
[Raw transfer]

-

CHAIN_B_2(2BDY)
?
[Raw transfer]

-

CHAIN_B_2(1ZRB)

[Raw transfer]

-

CHAIN_B_2(1ZGI)
?
[Raw transfer]

-

CHAIN_B_2(1TA2)
?
[Raw transfer]

-

CHAIN_B_2(1ZGV)
?
[Raw transfer]

-

CHAIN_B_2(1SL3)
?
[Raw transfer]

-

CHAIN_B_2(1NM6)
?
[Raw transfer]

-

CHAIN_I_3(7KME)

[Raw transfer]

-

CHAIN_I_2(1D6W)

[Raw transfer]

-

CHAIN_B_2(1Z71)

[Raw transfer]

-

CHAIN_I_5(4E7R)
?
[Raw transfer]

-

CHAIN_I_3(3RM2)
?
[Raw transfer]

-

CHAIN_F_6(3HKI)

[Raw transfer]

-

CHAIN_C_3(3HKI)
?
[Raw transfer]

-

CHAIN_J_6(4E7R)
?
[Raw transfer]

-

CHAIN_I_3(4NZE)
?
[Raw transfer]

-

CHAIN_I_3(4N3L)
?
[Raw transfer]

-

CHAIN_C_3(2PUX)
?
[Raw transfer]

-

4 PsiBlast_PDB 91.0088% -95 - C4 -1DOJ 7.2 ?
21 PsiBlast_CBE 90.1288% -92 - C4 -1NU9 6.8 ?
11 PsiBlast_PDB 90.1288% -95 - C4 -1D9I 6.5 ?
6 PsiBlast_PDB 89.9988% -96 - C4 -1JWT 6.0
12 PsiBlast_PDB 89.8888%-100 - C4 -1EOJ 12.2 ?
20 PsiBlast_PDB 89.8488% -98 - C4 -1ZRB 9.0
74 HHSearch 89.6989% -94 - C4 -2BDY 8.9 ?
14 PsiBlast_PDB 89.6088% -96 - C4 -1NM6 7.2 ?
23 PsiBlast_CBE 89.5788% -98 - C4 -1ZGV 7.9 ?
16 PsiBlast_PDB 89.5688% -96 - C4 -1TA2 7.2 ?
5 PsiBlast_PDB 89.3388% -96 - C4 -1XM1 9.2 ?
13 PsiBlast_PDB 89.3288% -99 - C4 -1EOL 10.2 ?
18 PsiBlast_PDB 89.2788% -95 - C4 -1SL3 9.7 ?
7 PsiBlast_PDB 89.1688% -93 - C4 -1NU9 6.2 ?
19 PsiBlast_PDB 89.0888% -94 - C4 -1Z71 9.9
25 PsiBlast_CBE 89.0488% -99 - C4 -1D6W 6.4
24 PsiBlast_CBE 88.8588% -95 - C4 -1ZGI 8.2 ?
22 PsiBlast_CBE 88.7888% -97 - C4 -3C1K 8.5 ?
17 PsiBlast_PDB 88.6788% -98 - C4 -1TA6 9.4 ?
15 PsiBlast_PDB 88.2688% -98 - C4 -1NT1 9.6
29 PsiBlast_CBE 87.7299%-111 - C4 -2PUX 6.5 ?
32 PsiBlast_CBE 86.4299%-111 - C4 -3HKI 5.9 ?
31 PsiBlast_CBE 86.0799%-114 - C4 -3HKI 7.0
76 HHSearch 84.3689%-111 - C4 -3RM2 9.5 ?
54 PsiBlast_CBE 84.1889%-114 - C4 -4DII 9.7 ?
43 PsiBlast_CBE 84.1589%-110 - C4 -4NZE 7.0 ?
46 PsiBlast_CBE 84.0089%-108 - C4 -4LZ4 10.9 ?
36 PsiBlast_CBE 83.9691%-111 - C4 -2OD3 6.7 ?
55 PsiBlast_CBE 83.8889%-114 - C4 -4DIH 11.1 ?
60 PsiBlast_CBE 83.8789%-108 - C4 -4CH2 6.6 ?
57 PsiBlast_CBE 83.8489%-110 - C4 -4CH8 4.9 ?
59 PsiBlast_CBE 83.8089%-112 - C4 -4CH8 5.2 ?
58 PsiBlast_CBE 83.6189%-110 - C4 -4CH8 4.9 ?
44 PsiBlast_CBE 83.6189%-110 - C4 -4N3L 8.4 ?
45 PsiBlast_CBE 83.5989%-108 - C4 -4LZ4 9.8 ?
40 PsiBlast_CBE 83.4689%-109 - C4 -7KME 7.6
47 PsiBlast_CBE 83.1989%-110 - C4 -4LZ1 11.2 ?
51 PsiBlast_CBE 83.0489%-108 - C4 -4E7R 9.7 ?
48 PsiBlast_CBE 82.9589%-109 - C4 -4I7Y 6.2 ?
56 PsiBlast_CBE 82.8489%-105 - C4 -4CH8 5.3 ?
50 PsiBlast_CBE 82.8389%-109 - C4 -4E7R 9.4 ?
39 PsiBlast_CBE 81.9188%-107 - C4 -1DM4 4.9 ?
85 HHSearch 65.0039%-102 - C4 -2WPH 4.8 ?
94 HHSearch 60.8335% -97 - C4 -4JZE 6.4 ?