@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00089_TRY1_R: (2014-08-23 )
MSALLILALVGAAVAFPLEDDDKIVGGYTCPEHSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGDEQFINAAKIIKHPNYSSWTLNNDIMLIKLSSPVKLNARVAPVALPSACAPAGTQCLISGWGNTLSNGVNNPDLLQCVDAPVLSQADCEAAYPGEITSSMICVGFLEGGKDSCQGDSGGPVVCNGQLQGIVSWGYGCALPDNPGVYTKVCNFVGWIQDTIAAN

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0IV_A_2(1ZZZ)
TRY1_BOVIN
[Raw transfer]




BEN_A_4(1J14)
TRY2_RAT
[Raw transfer]




BEN_A_3(1AND)
TRY2_RAT
[Raw transfer]




BEN_A_5(1TRM)
TRY2_RAT
[Raw transfer]




BEN_A_3(4I8H)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY5)
TRY1_BOVIN
[Raw transfer]




BEN_C_3(1ANE)
TRY2_RAT
[Raw transfer]




BEN_A_5(1DPO)
TRY2_RAT
[Raw transfer]




BEN_A_3(1ANC)
TRY2_RAT
[Raw transfer]




BEN_A_4(1J15)
TRY2_RAT
[Raw transfer]




BAM_X_2(2BY8)
TRY1_BOVIN
[Raw transfer]




RPR_A_4(1F0U)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY7)
TRY1_BOVIN
[Raw transfer]




PR1_A_5(1F0T)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BY9)
TRY1_BOVIN
[Raw transfer]




BAM_X_2(2BYA)
TRY1_BOVIN
[Raw transfer]




BEN_A_3(1ANB)
TRY2_RAT
[Raw transfer]




BAM_X_2(2BY6)
TRY1_BOVIN
[Raw transfer]




BEN_B_6(1TRM)
TRY2_RAT
[Raw transfer]




BEN_A_3(2TRM)
TRY2_RAT
[Raw transfer]




BEN_A_3(1BRA)
TRY2_RAT
[Raw transfer]




IMA_A_4(1LQE)
TRY1_BOVIN
[Raw transfer]




BEN_A_8(2AIQ)
VSPCA_AGKCO
[Raw transfer]




BEN_A_3(1LO6)
KLK6_HUMAN
[Raw transfer]




FMT_A_15(3L3T)
TRY3_HUMAN
[Raw transfer]




PBZ_A_11(2BDG)
KLK4_HUMAN
[Raw transfer]




ZEN_A_4(1QL9)
TRY2_RAT
[Raw transfer]




FMT_B_19(3L33)
TRY3_HUMAN
[Raw transfer]




ZEN_T_4(1J17)
TRY2_RAT
[Raw transfer]




CHAIN_B_2(1YF4)
TRYP_PIG
[Raw transfer]

-

CHAIN_B_2(3S9C)
VSPG_DABSI
[Raw transfer]

-

K7J_A_2(2QXI)
KLK7_HUMAN
[Raw transfer]




EDO_E_7(3FP8)
TRY2_RAT
[Raw transfer]




EDO_E_6(3FP8)
TRY2_RAT
[Raw transfer]




CHAIN_I_2(3FP7)
TRY2_RAT
[Raw transfer]

-

EDO_E_7(3FP7)
TRY2_RAT
[Raw transfer]




MOH_A_6(1FN6)
?
[Raw transfer]




CHAIN_I_3(1FXY)
TRY1_HUMAN
[Raw transfer]

-

DFP_A_3(2TGD)
TRY1_BOVIN
[Raw transfer]




CHAIN_B_2(2PSX)
KLK5_HUMAN
[Raw transfer]

-

ACE_B_4(2PSX)
KLK5_HUMAN
[Raw transfer]




CH2_I_5(1FXY)
TRY1_HUMAN
[Raw transfer]




32 PsiBlast_CBE 97.2089%-128 - C1 -1J14 3.0 TRY2_RAT
12 PsiBlast_PDB 96.7389%-127 - C1 -1AND 3.2 TRY2_RAT
35 PsiBlast_CBE 96.5988%-126 - C1 -1BRA 2.6 TRY2_RAT
18 PsiBlast_PDB 96.2289%-125 - C1 -3FP8 3.3 TRY2_RAT
34 PsiBlast_CBE 96.1389%-123 - C1 -1DPO 3.3 TRY2_RAT
8 PsiBlast_PDB 96.0989%-125 - C1 -1ANE 3.2 TRY2_RAT
17 PsiBlast_PDB 95.6989%-124 - C1 -3FP7 3.6 TRY2_RAT
25 PsiBlast_CBE 95.3189%-124 - C1 -1TRM 3.1 TRY2_RAT
31 PsiBlast_CBE 95.3089%-126 - C1 -1QL9 6.3 TRY2_RAT
23 PsiBlast_CBE 95.3089%-130 - C1 -2TRM 3.1 TRY2_RAT
37 PsiBlast_CBE 95.2587%-129 - C1 -1J16 - TRY2_RAT
20 PsiBlast_PDB 95.2589%-124 - C1 -1ANB 3.6 TRY2_RAT
36 PsiBlast_CBE 94.4887%-127 - C1 -1J17 6.7 TRY2_RAT
19 PsiBlast_PDB 94.2389%-125 - C1 -1ANC 3.5 TRY2_RAT
24 PsiBlast_CBE 94.2189%-125 - C1 -1TRM 3.2 TRY2_RAT
38 PsiBlast_CBE 93.8487%-128 - C1 -1J15 3.2 TRY2_RAT
50 PsiBlast_CBE 91.5973%-125 - C1 -1F0U 8.2 TRY1_BOVIN
58 PsiBlast_CBE 91.2178%-121 - C1 -1YF4 8.7 TRYP_PIG
49 PsiBlast_CBE 91.1373%-125 - C1 -1LQE 7.0 TRY1_BOVIN
73 PsiBlast_CBE 91.0078%-124 - C1 -1FN6 2.8 ?
104 PsiBlast_CBE 90.9276%-123 - C1 -3L33 - TRY3_HUMAN
52 PsiBlast_CBE 90.9273%-122 - C1 -1ZZZ 4.0 TRY1_BOVIN
45 PsiBlast_CBE 90.7773%-124 - C1 -2BY8 3.5 TRY1_BOVIN
51 PsiBlast_CBE 90.3573%-124 - C1 -1F0T 5.4 TRY1_BOVIN
103 PsiBlast_CBE 90.2576%-122 - C1 -3L33 2.8 TRY3_HUMAN
115 HHSearch 90.2074%-123 - C1 -4I8H 3.3 TRY1_BOVIN
48 PsiBlast_CBE 90.0873%-123 - C1 -2BY5 3.5 TRY1_BOVIN
100 PsiBlast_CBE 89.7976%-123 - C1 -3L3T 2.8 TRY3_HUMAN
47 PsiBlast_CBE 89.6873%-123 - C1 -2BY6 3.4 TRY1_BOVIN
43 PsiBlast_CBE 89.5173%-122 - C1 -2BYA 3.5 TRY1_BOVIN
46 PsiBlast_CBE 89.4473%-123 - C1 -2BY7 3.4 TRY1_BOVIN
44 PsiBlast_CBE 89.1073%-123 - C1 -2BY9 3.4 TRY1_BOVIN
99 PsiBlast_CBE 89.0376%-119 - C1 -3L3T - TRY3_HUMAN
84 PsiBlast_CBE 84.9373%-116 - C1 -2TGD 2.6 TRY1_BOVIN
117 HHSearch 81.3057%-117 - C1 -1FXY 4.9 TRY1_HUMAN
120 HHSearch 75.1550%-108 * C1 *2PSX 3.6 KLK5_HUMAN
118 HHSearch 74.6946%-115 - C1 -1LO6 2.9 KLK6_HUMAN
130 HHSearch 74.4146%-108 - C1 -2QXI 3.9 KLK7_HUMAN
126 HHSearch 73.8642%-111 - C1 -2BDG 3.0 KLK4_HUMAN
137 HHSearch 70.6941%-111 - C1 -2AIQ 3.0 VSPCA_AGKCO
131 HHSearch 70.2141%-109 - C1 -3S9C 4.4 VSPG_DABSI