@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00092_ITAL_H: (2014-08-24 )
MKDSCITVMAMALLSGFFFFAPASSYNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYLSGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAPRYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPVVDMVTLMSFSPAEIPVHEVECSYSTSNKMKEGVNITICFQIKSLIPQFQGRLVANLTYTLQLDGHRTRRRGLFPGGRHELRRNIAVTTSMSCTDFSFHFPVCVQDLISPINVSLNFSLWEEEGTPRDQRAQGKDIPPILRPSLHSETWEIPFEKNCGEDKKCEANLRVSFSPARSRALRLTAFASLSVELSLSNLEEDAYWVQLDLHFPPGLSFRKVEMLKPHSQIPVSCEELPEESRLLSRALSCNVSSPIFKAGHSVALQMMFNTLVNSSWGDSVELHANVTCNNEDSDLLEDNSATTIIPILYPINILIQDQEDSTLYVSFTPKGPKIHQVKHMYQVRIQPSIHDHNIPTLEAVVGVPQPPSEGPITHQWSVQMEPPVPCHYEDLERLPDAAEPCLPGALFRCPVVFRQEILVQVIGTLELVGEIEASSMFSLCSSLSISFNSSKHFHLYGSNASLAQVVMKVDVVYEKQMLYLYVLSGIGGLLLLLLIFIVLYKVGFFKRNLKEKMEAGRGVPNGIPAEDSEQLASGQEAGDPGCLKPLHEKDSESGGGKD

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(3F78)
ITAL_HUMAN
[Raw transfer]




AAY_B_6(1XDD)
ITAL_HUMAN
[Raw transfer]




E2M_B_3(3E2M)
ITAL_HUMAN
[Raw transfer]




BQN_B_3(3BQN)
ITAL_HUMAN
[Raw transfer]




BQN_C_4(3BQN)
ITAL_HUMAN
[Raw transfer]




E2M_A_4(3E2M)
ITAL_HUMAN
[Raw transfer]




BQM_C_4(3BQM)
ITAL_HUMAN
[Raw transfer]




1HV_A_3(4IXD)
?
[Raw transfer]




AAY_A_5(1XDD)
ITAL_HUMAN
[Raw transfer]




BQM_B_3(3BQM)
ITAL_HUMAN
[Raw transfer]




L08_G_7(1RD4)
ITAL_HUMAN
[Raw transfer]




LA1_A_5(1XUO)
ITAL_HUMAN
[Raw transfer]




803_B_6(1CQP)
ITAL_HUMAN
[Raw transfer]




L08_E_5(1RD4)
ITAL_HUMAN
[Raw transfer]




L08_F_6(1RD4)
ITAL_HUMAN
[Raw transfer]




803_A_5(1CQP)
ITAL_HUMAN
[Raw transfer]




GOL_C_10(3F78)
ITAL_HUMAN
[Raw transfer]




2IC_A_2(2ICA)
ITAL_HUMAN
[Raw transfer]




BJZ_A_2(3M6F)
ITAL_HUMAN
[Raw transfer]




2O7_A_2(2O7N)
ITAL_HUMAN
[Raw transfer]




ICF_B_6(3F78)
ITAL_HUMAN
[Raw transfer]




ICF_A_4(3F78)
ITAL_HUMAN
[Raw transfer]




AAY_A_5(1XDD)
ITAL_HUMAN
[Raw transfer]




5 PsiBlast_PDB 51.9998%-100 - C1 -1RD4 7.3 ITAL_HUMAN
22 PsiBlast_CBE 51.9798% -98 - C1 -1RD4 7.2 ITAL_HUMAN
23 PsiBlast_CBE 51.9098%-100 - C1 -1RD4 7.3 ITAL_HUMAN
21 PsiBlast_CBE 51.6198% -97 - C1 -1RD4 - ITAL_HUMAN
15 PsiBlast_PDB 51.5899%-100 - C1 -1CQP 5.5 ITAL_HUMAN
29 PsiBlast_CBE 51.5799% -97 - C1 -1XDD 7.0 ITAL_HUMAN
35 PsiBlast_CBE 51.5399%-103 - C1 -3F78 3.2 ITAL_HUMAN
9 PsiBlast_PDB 51.4199% -96 - C1 -1XUO 10.5 ITAL_HUMAN
34 PsiBlast_CBE 51.3199%-100 - C1 -1CQP 5.6 ITAL_HUMAN
17 PsiBlast_PDB 51.3199% -99 - C1 -3BQN 7.5 ITAL_HUMAN
12 PsiBlast_PDB 51.2899% -95 - C1 -3E2M 6.9 ITAL_HUMAN
32 PsiBlast_CBE 51.2799% -96 - C1 -3BQN 7.3 ITAL_HUMAN
30 PsiBlast_CBE 51.2699% -93 - C1 -3E2M 6.8 ITAL_HUMAN
19 PsiBlast_PDB 51.26100% -98 - C1 -2O7N 8.4 ITAL_HUMAN
18 PsiBlast_PDB 51.25100% -96 - C1 -2ICA 8.3 ITAL_HUMAN
11 PsiBlast_PDB 51.2599% -98 - C1 -4IXD 7.3 ?
7 PsiBlast_PDB 51.2499% -95 - C1 -1XDD 8.3 ITAL_HUMAN
33 PsiBlast_CBE 51.1999% -96 - C1 -3BQM 7.2 ITAL_HUMAN
20 PsiBlast_PDB 51.19100% -96 - C1 -3M6F 8.6 ITAL_HUMAN
16 PsiBlast_PDB 51.1999% -98 - C1 -3BQM 6.9 ITAL_HUMAN
36 PsiBlast_CBE 51.1499% -96 - C1 -3F78 3.9 ITAL_HUMAN
37 PsiBlast_CBE 51.1399% -95 - C1 -3F78 3.5 ITAL_HUMAN
28 PsiBlast_CBE 50.8999% -96 - C1 -1XDG - ITAL_HUMAN