@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00092_ITAL_M: (2014-08-24 )
MSFRIAGPRLLLLGLQLFAKAWSYNLDTRPTQSFLAQAGRHFGYQVLQIEDGVVVGAPGEGDNTGGLYHCRTSSEFCQPVSLHGSNHTSKYLGMTLATDAAKGSLLACDPGLSRTCDQNTYLSGLCYLFPQSLEGPMLQNRPAYQECMKGKVDLVFLFDGSQSLDRKDFEKILEFMKDVMRKLSNTSYQFAAVQFSTDCRTEFTFLDYVKQNKNPDVLLGSVQPMFLLTNTFRAINYVVAHVFKEESGARPDATKVLVIITDGEASDKGNISAAHDITRYIIGIGKHFVSVQKQKTLHIFASEPVEEFVKILDTFEKLKDLFTDLQRRIYAIEGTNRQDLTSFNMELSSSGISADLSKGHAVVGAVGAKDWAGGFLDLREDLQGATFVGQEPLTSDVRGGYLGYTVAWMTSRSSRPLLAAGAPRYQHVGQVLLFQAPEAGGRWNQTQKIEGTQIGSYFGGELCSVDLDQDGEAELLLIGAPLFFGEQRGGRVFTYQRRQSLFEMVSELQGDPGYPLGRFGAAITALTDINGDRLTDVAVGAPLEEQGAVYIFNGKPGGLSPQPSQRIQGAQVFPGIRWFGRSIHGVKDLGGDRLADVVVGAEGRVVVLSSRPVVDVVTELSFSPEEIPVHEVECSYSAREEQKHGVKLKACFRIKPLTPQFQGRLLANLSYTLQLDGHRMRSRGLFPDGSHELSGNTSITPDKSCLDFHFHFPICIQDLISPINVSLNFSLLEEEGTPRDQKGRAMQPILRPSIHTVTKEIPFEKNCGEDKKCEANLTLSSPARSGPLRLMSSASLAVEWTLSNSGEDAYWVRLDLDFPRGLSFRKVEMLQPHSRMPVSCEELTEGSSLLTKTLKCNVSSPIFKAGQEVSLQVMFNTLLNSSWEDFVELNGTVHCENENSSLQEDNSAATHIPVLYPVNILTKEQENSTLYISFTPKGPKTQQVQHVYQVRIQPSAYDHNMPTLEALVGVPWPHSEDPITYTWSVQTDPLVTCHSEDLKRPSSEAEQPCLPGVQFRCPIVFRREILIQVTGTVELSKEIKASSTLSLCSSLSVSFNSSKHFHLYGSKASEAQVLVKVDLIHEKEMLHVYVLSGIGGLVLLFLIFLALYKVGFFKRNLKEKMEADGGVPNGSPPEDTDPLAVPGEETKDMGCLEPSGRVTRTKA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(3F78)
ITAL_HUMAN
[Raw transfer]



E2M_B_3(3E2M)
ITAL_HUMAN
[Raw transfer]



AAY_B_6(1XDD)
ITAL_HUMAN
[Raw transfer]



BQN_C_4(3BQN)
ITAL_HUMAN
[Raw transfer]



BQN_B_3(3BQN)
ITAL_HUMAN
[Raw transfer]



AAY_A_5(1XDD)
ITAL_HUMAN
[Raw transfer]



E2M_A_4(3E2M)
ITAL_HUMAN
[Raw transfer]



BQM_C_4(3BQM)
ITAL_HUMAN
[Raw transfer]



BQM_B_3(3BQM)
ITAL_HUMAN
[Raw transfer]



GOL_C_10(3F78)
ITAL_HUMAN
[Raw transfer]



803_B_6(1CQP)
ITAL_HUMAN
[Raw transfer]



L08_G_7(1RD4)
ITAL_HUMAN
[Raw transfer]



1HV_A_3(4IXD)
?
[Raw transfer]



LA1_A_5(1XUO)
ITAL_HUMAN
[Raw transfer]



AB8_B_6(1XDG)
ITAL_HUMAN
[Raw transfer]



L08_F_6(1RD4)
ITAL_HUMAN
[Raw transfer]



L08_E_5(1RD4)
ITAL_HUMAN
[Raw transfer]



803_A_5(1CQP)
ITAL_HUMAN
[Raw transfer]



BJZ_A_2(3M6F)
ITAL_HUMAN
[Raw transfer]



2IC_A_2(2ICA)
ITAL_HUMAN
[Raw transfer]



2O7_A_2(2O7N)
ITAL_HUMAN
[Raw transfer]



ICF_B_6(3F78)
ITAL_HUMAN
[Raw transfer]



ICF_A_4(3F78)
ITAL_HUMAN
[Raw transfer]



AAY_A_5(1XDD)
ITAL_HUMAN
[Raw transfer]
26 PsiBlast_CBE 47.9473%-100 - C4 -1RD4 6.0 ITAL_HUMAN
25 PsiBlast_CBE 47.8873% -98 - C4 -1RD4 7.0 ITAL_HUMAN
36 PsiBlast_CBE 47.8173%-100 - C4 -3F78 3.6 ITAL_HUMAN
35 PsiBlast_CBE 47.8073%-106 - C4 -3F78 3.2 ITAL_HUMAN
19 PsiBlast_PDB 47.7973% -98 - C4 -3F78 3.4 ITAL_HUMAN
6 PsiBlast_PDB 47.7673%-101 - C4 -1RD4 7.0 ITAL_HUMAN
24 PsiBlast_CBE 47.5373% -97 - C4 -1RD4 - ITAL_HUMAN
11 PsiBlast_PDB 47.4373% -99 - C4 -4IXD 7.1 ?
9 PsiBlast_PDB 47.3973% -96 - C4 -1XUO 9.7 ITAL_HUMAN
7 PsiBlast_PDB 47.2773% -94 - C4 -1XDD 8.2 ITAL_HUMAN
14 PsiBlast_PDB 47.2573% -96 - C4 -3BQM 6.9 ITAL_HUMAN
32 PsiBlast_CBE 47.2073% -95 - C4 -3BQM 6.8 ITAL_HUMAN
12 PsiBlast_PDB 47.1973% -97 - C4 -3E2M 6.8 ITAL_HUMAN
29 PsiBlast_CBE 47.1573% -95 - C4 -1XDD 6.7 ITAL_HUMAN
28 PsiBlast_CBE 47.1273% -96 - C4 -1XDG 6.0 ITAL_HUMAN
13 PsiBlast_PDB 47.0973%-100 - C4 -1CQP 5.3 ITAL_HUMAN
39 PsiBlast_CBE 47.0773%-102 - C4 -3M6F 8.4 ITAL_HUMAN
33 PsiBlast_CBE 47.0673% -98 - C4 -1CQP 5.5 ITAL_HUMAN
20 PsiBlast_PDB 46.9573% -99 - C4 -2ICA 8.3 ITAL_HUMAN
15 PsiBlast_PDB 46.9273% -97 - C4 -3BQN 7.3 ITAL_HUMAN
40 PsiBlast_CBE 46.9073%-101 - C4 -2O7N 7.9 ITAL_HUMAN
31 PsiBlast_CBE 46.8673% -95 - C4 -3BQN 6.5 ITAL_HUMAN
30 PsiBlast_CBE 46.7473% -92 - C4 -3E2M 6.4 ITAL_HUMAN