@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00098_POL_HV: (2014-08-24 )
MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALDKIEEEQNKSKKKAQQAAADTGHSNQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKIVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLREDLAFLQGKAREFSSEQTRANSPTRRELQVWGRDNNSPSEAGADRQGTVSFNFPQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESI

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

T27_A_3(3MEE)

[Raw transfer]




3OB_A_3(3FFI)
?
[Raw transfer]




DJZ_A_3(3M8Q)

[Raw transfer]




T27_A_3(3MEG)
?
[Raw transfer]




KBT_A_3(3LAN)
?
[Raw transfer]




R8D_A_3(3DRS)
?
[Raw transfer]




65B_A_3(3MEC)
POL_HV1H2
[Raw transfer]




KRP_A_3(3LAM)

[Raw transfer]




PZ2_A_3(3E01)

[Raw transfer]




185_A_4(1SUQ)
POL_HV1B1
[Raw transfer]




JGZ_A_5(3NBP)

[Raw transfer]




65B_A_3(3M8P)
?
[Raw transfer]




ZZE_A_3(2WOM)

[Raw transfer]




KR1_A_3(3LAK)

[Raw transfer]




ZZE_A_3(2WON)
?
[Raw transfer]




357_A_4(2BAN)
?
[Raw transfer]




GOL_A_7(2BE2)
?
[Raw transfer]




EUR_A_4(2YNH)
?
[Raw transfer]




NVE_A_3(4I7F)

[Raw transfer]




KRV_A_3(3LAL)
?
[Raw transfer]




65B_A_3(3MED)
POL_HV1H2
[Raw transfer]




TT1_A_3(2RKI)

[Raw transfer]




WHU_A_7(2YNF)
?
[Raw transfer]




WHU_A_7(2YNG)

[Raw transfer]




M06_A_3(3TAM)
?
[Raw transfer]




1WT_A_4(4KV8)
?
[Raw transfer]




CXD_A_5(2YNI)

[Raw transfer]




R8E_A_3(3DRR)
?
[Raw transfer]




NVP_A_6(3LP1)
?
[Raw transfer]




5MA_A_3(3T1A)

[Raw transfer]




M22_A_3(3C6U)
?
[Raw transfer]




5MA_A_3(3T19)
?
[Raw transfer]




RT7_A_3(3I0S)
?
[Raw transfer]




I15_A_3(2JLE)
?
[Raw transfer]




NVP_A_6(3LP0)

[Raw transfer]




NNC_A_3(2VG5)
?
[Raw transfer]




PZL_A_3(3DYA)
POL_HV1H2
[Raw transfer]




NVP_A_3(3QIP)

[Raw transfer]




NVP_A_5(4B3Q)
?
[Raw transfer]




PDZ_A_3(3DI6)

[Raw transfer]




R8E_A_3(3DRP)

[Raw transfer]




2KW_A_3(4NCG)
?
[Raw transfer]




EFZ_A_3(1IKW)
POL_HV1B1
[Raw transfer]




RT3_A_3(3I0R)

[Raw transfer]




R22_A_6(2BE2)
?
[Raw transfer]




EFZ_A_5(4B3O)

[Raw transfer]




CP9_C_3(1TV6)

[Raw transfer]




M14_A_3(3C6T)

[Raw transfer]




NNI_A_3(2VG7)
POL_HV1B1
[Raw transfer]




3AC_A_4(2B5J)
?
[Raw transfer]




U05_D_4(1RTH)
?
[Raw transfer]




T50_C_3(2B6A)

[Raw transfer]




HEF_D_4(1RTI)

[Raw transfer]




MRX_A_3(2RF2)
?
[Raw transfer]




NVP_C_3(3HVT)
?
[Raw transfer]




LP9_A_3(3LP2)

[Raw transfer]




NVP_A_4(1VRT)

[Raw transfer]




EDM_C_3(3ISN)
?
[Raw transfer]




CHAIN_D_3(4B3Q)
?
[Raw transfer]

-

NACID_D_3(4B3O)

[Raw transfer]

-

CHAIN_D_3(4B3P)

[Raw transfer]

-

37 PsiBlast_CBE 99.86100% -76 - C6 -1RTI 6.9
35 PsiBlast_CBE 98.74100% -71 - C6 -2RKI 10.0
24 PsiBlast_CBE 98.35100% -69 - C6 -3MEE 9.2
38 PsiBlast_CBE 98.15100% -72 - C6 -1RTH 7.5 ?
22 PsiBlast_CBE 97.61100% -67 - C6 -4I7F 11.2
34 PsiBlast_CBE 97.54100% -72 - C6 -2WON 8.7 ?
33 PsiBlast_CBE 97.53100% -69 - C6 -3LAK 10.2
57 PsiBlast_CBE 97.4399% -72 - C6 -2VG5 6.2 ?
40 PsiBlast_CBE 97.38100% -75 - C6 -3NBP 9.7
21 PsiBlast_CBE 97.3499% -69 - C6 -4KV8 11.1 ?
27 PsiBlast_CBE 97.30100% -71 - C6 -3LAN 8.6 ?
59 PsiBlast_CBE 97.2999% -70 - C6 -3MED 9.0 POL_HV1H2
43 PsiBlast_CBE 97.28100% -75 - C6 -3E01 10.2
9 PsiBlast_PDB 97.2799% -67 - C6 -2YNH 10.8 ?
49 PsiBlast_CBE 97.2699% -69 - C6 -1IKW 7.5 POL_HV1B1
10 PsiBlast_PDB 97.2599% -70 - C6 -2YNI 10.7
17 PsiBlast_PDB 97.2199% -72 - C6 -3TAM 11.1 ?
8 PsiBlast_PDB 97.1799% -71 - C6 -2YNG 11.0
2 PsiBlast_PDB 97.1299% -70 - C6 -3C6T 10.0
31 PsiBlast_CBE 97.09100% -68 - C6 -3LAL 8.2 ?
29 PsiBlast_CBE 97.09100% -68 - C6 -3LAM 7.4
45 PsiBlast_CBE 97.04100% -76 - C6 -3DI6 8.4
60 PsiBlast_CBE 97.0199% -74 - C6 -2WOM 8.8
25 PsiBlast_CBE 96.88100% -75 - C6 -3MEC 9.2 POL_HV1H2
13 PsiBlast_PDB 96.8399% -73 - C6 -3LP0 7.4
23 PsiBlast_CBE 96.76100% -71 - C6 -3QIP 7.9
16 PsiBlast_PDB 96.7299% -72 - C6 -3T1A 11.6
15 PsiBlast_PDB 96.7199% -72 - C6 -3LP2 8.2
3 PsiBlast_PDB 96.7099% -67 - C6 -3C6U 10.0 ?
4 PsiBlast_PDB 96.5999% -71 - C6 -3DRP 10.8
41 PsiBlast_CBE 96.58100% -72 - C6 -3M8Q 10.7
14 PsiBlast_PDB 96.5599% -72 - C6 -3LP1 7.8 ?
20 PsiBlast_PDB 96.50100% -69 - C6 -2JLE 8.0 ?
44 PsiBlast_CBE 96.47100% -73 - C6 -3DYA 11.4 POL_HV1H2
7 PsiBlast_PDB 96.4599% -71 - C6 -3T19 11.6 ?
6 PsiBlast_PDB 96.4599% -69 - C6 -3I0S 8.8 ?
39 PsiBlast_CBE 96.3799% -74 - C6 -3FFI 10.8 ?
42 PsiBlast_CBE 96.29100% -74 - C6 -3M8P 9.4 ?
58 PsiBlast_CBE 96.2899% -66 - C6 -3MEG 9.0 ?
5 PsiBlast_PDB 96.2899% -70 - C6 -3I0R 6.3
56 PsiBlast_CBE 96.2299% -70 - C6 -2VG7 6.8 POL_HV1B1
48 PsiBlast_CBE 96.1299% -74 - C6 -3ISN 2.7 ?
19 PsiBlast_PDB 96.0399% -70 - C6 -3DRR 9.2 ?
1 PsiBlast_PDB 96.0099% -71 - C6 -2RF2 6.8 ?
66 PsiBlast_CBE 95.6499% -67 - C6 -2B6A 9.0
11 PsiBlast_PDB 95.5299% -70 - C6 -4NCG 10.5 ?
50 PsiBlast_CBE 95.4699% -66 - C6 -1TV6 9.4
18 PsiBlast_PDB 95.3799% -71 - C6 -2YNF 9.1 ?
12 PsiBlast_PDB 95.2999% -70 - C6 -3DRS 7.3 ?
62 PsiBlast_CBE 94.9999% -74 - C6 -4B3Q 6.2 ?
64 PsiBlast_CBE 94.9799% -64 - C6 -2BE2 8.4 ?
63 PsiBlast_CBE 94.6099% -75 - C6 -4B3O 6.6
68 PsiBlast_CBE 94.1199% -70 - C6 -1SUQ 8.1 POL_HV1B1
67 PsiBlast_CBE 92.8999% -59 - C6 -2B5J 6.5 ?
65 PsiBlast_CBE 92.0099% -65 - C6 -2BAN 4.8 ?
55 PsiBlast_CBE 90.7099% -62 - C6 -3HVT 6.6 ?
61 PsiBlast_CBE 89.8899% -71 - C6 -4B3P 6.8
73 Fugue 64.1994% -60 - C6 -1VRT 5.3