@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00098_POL_HV: (2014-08-24 )
MGARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTIAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNYPIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNPATIMIQKGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLREDLAFPQGKAREFSSEQTRANSPTRRELQVWGRDNNSLSEAGADRQGTVSFSFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKQKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVVPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMKGAHTNDVKQLTEAVQKIATESI

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

T27_A_3(3MEE)

[Raw transfer]




DJZ_A_3(3M8Q)

[Raw transfer]




3OB_A_3(3FFI)
?
[Raw transfer]




R8D_A_3(3DRS)
?
[Raw transfer]




T27_A_3(3MEG)
?
[Raw transfer]




NVE_A_3(4I7F)

[Raw transfer]




PZ2_A_3(3E01)

[Raw transfer]




EUR_A_4(2YNH)
?
[Raw transfer]




JGZ_A_5(3NBP)

[Raw transfer]




1WT_A_4(4KV8)
?
[Raw transfer]




ZZE_A_3(2WOM)

[Raw transfer]




5MA_A_3(3T1A)

[Raw transfer]




KBT_A_3(3LAN)
?
[Raw transfer]




R8E_A_3(3DRR)
?
[Raw transfer]




ZZE_A_3(2WON)
?
[Raw transfer]




65B_A_3(3MEC)
POL_HV1H2
[Raw transfer]




65B_A_3(3M8P)
?
[Raw transfer]




NVP_A_6(3LP1)
?
[Raw transfer]




CXD_A_5(2YNI)

[Raw transfer]




KR1_A_3(3LAK)

[Raw transfer]




KRP_A_3(3LAM)

[Raw transfer]




M22_A_3(3C6U)
?
[Raw transfer]




M06_A_3(3TAM)
?
[Raw transfer]




TT1_A_3(2RKI)

[Raw transfer]




65B_A_3(3MED)
POL_HV1H2
[Raw transfer]




5MA_A_3(3T19)
?
[Raw transfer]




WHU_A_7(2YNF)
?
[Raw transfer]




WHU_A_7(2YNG)

[Raw transfer]




PDZ_A_3(3DI6)

[Raw transfer]




NVP_A_3(3QIP)

[Raw transfer]




KRV_A_3(3LAL)
?
[Raw transfer]




RT7_A_3(3I0S)
?
[Raw transfer]




NVP_A_6(3LP0)

[Raw transfer]




PZL_A_3(3DYA)
POL_HV1H2
[Raw transfer]




2KW_A_3(4NCG)
?
[Raw transfer]




MSD_C_3(1IKY)
POL_HV1B1
[Raw transfer]




R8E_A_3(3DRP)

[Raw transfer]




NVP_A_5(4B3Q)
?
[Raw transfer]




RT3_A_3(3I0R)

[Raw transfer]




I15_A_3(2JLE)
?
[Raw transfer]




CP9_C_3(1TV6)

[Raw transfer]




NNC_A_3(2VG5)
?
[Raw transfer]




U05_D_4(1RTH)
?
[Raw transfer]




M14_A_3(3C6T)

[Raw transfer]




EFZ_A_3(1IKW)
POL_HV1B1
[Raw transfer]




NNI_A_3(2VG7)
POL_HV1B1
[Raw transfer]




EFZ_A_5(4B3O)

[Raw transfer]




EFZ_A_3(1IKV)
?
[Raw transfer]




PNU_A_3(1IKX)
POL_HV1B1
[Raw transfer]




MRX_A_3(2RF2)
?
[Raw transfer]




NVP_C_3(3HVT)
?
[Raw transfer]




HEF_D_4(1RTI)

[Raw transfer]




LP9_A_3(3LP2)

[Raw transfer]




NVP_A_4(1VRT)

[Raw transfer]




EDM_C_3(3ISN)
?
[Raw transfer]




CHAIN_D_3(4B3Q)
?
[Raw transfer]

-

NACID_D_3(4B3O)

[Raw transfer]

-

CHAIN_D_3(4B3P)

[Raw transfer]

-

36 PsiBlast_CBE 99.1997% -78 - C5 -1RTI 6.9
59 PsiBlast_CBE 97.8897% -75 - C5 -2VG5 6.2 ?
23 PsiBlast_CBE 97.6997% -72 - C5 -3MEE 9.2
56 PsiBlast_CBE 97.6197% -72 - C5 -3MED 9.0 POL_HV1H2
34 PsiBlast_CBE 97.5997% -73 - C5 -2RKI 10.0
38 PsiBlast_CBE 97.5297% -77 - C5 -3NBP 9.7
37 PsiBlast_CBE 97.4197% -73 - C5 -1RTH 7.5 ?
17 PsiBlast_PDB 97.3897% -76 - C5 -3TAM 11.1 ?
22 PsiBlast_CBE 97.3197% -74 - C5 -3QIP 7.9
57 PsiBlast_CBE 97.2597% -76 - C5 -2WOM 8.8
43 PsiBlast_CBE 97.2597% -78 - C5 -3DI6 8.3
65 PsiBlast_CBE 97.1797% -73 - C5 -1IKX 7.2 POL_HV1B1
10 PsiBlast_PDB 97.1697% -73 - C5 -2YNI 10.7
41 PsiBlast_CBE 97.1597% -77 - C5 -3E01 10.2
13 PsiBlast_PDB 97.1297% -76 - C5 -3LP0 7.4
16 PsiBlast_PDB 97.1197% -75 - C5 -3T1A 11.6
14 PsiBlast_PDB 97.1097% -74 - C5 -3LP1 7.8 ?
7 PsiBlast_PDB 97.0797% -74 - C5 -3T19 11.6 ?
45 PsiBlast_CBE 97.0697% -72 - C5 -4KV8 11.1 ?
15 PsiBlast_PDB 97.0697% -74 - C5 -3LP2 8.2
2 PsiBlast_PDB 97.0297% -73 - C5 -3C6T 10.0
9 PsiBlast_PDB 96.9597% -70 - C5 -2YNH 10.8 ?
33 PsiBlast_CBE 96.9497% -75 - C5 -2WON 8.7 ?
39 PsiBlast_CBE 96.9397% -74 - C5 -3M8Q 10.7
64 PsiBlast_CBE 96.9297% -72 - C5 -1IKY 7.8 POL_HV1B1
66 PsiBlast_CBE 96.8697% -76 - C5 -1IKV 7.1 ?
1 PsiBlast_PDB 96.8697% -74 - C5 -2RF2 6.8 ?
32 PsiBlast_CBE 96.8097% -72 - C5 -3LAK 10.2
55 PsiBlast_CBE 96.7797% -68 - C5 -3MEG 9.0 ?
26 PsiBlast_CBE 96.7397% -73 - C5 -3LAN 8.6 ?
21 PsiBlast_CBE 96.7397% -70 - C5 -4I7F 11.2
8 PsiBlast_PDB 96.7197% -74 - C5 -2YNG 11.0
49 PsiBlast_CBE 96.6697% -71 - C5 -1IKW 7.5 POL_HV1B1
58 PsiBlast_CBE 96.6397% -73 - C5 -2VG7 6.8 POL_HV1B1
30 PsiBlast_CBE 96.3997% -70 - C5 -3LAL 8.2 ?
42 PsiBlast_CBE 96.3797% -75 - C5 -3DYA 11.3 POL_HV1H2
18 PsiBlast_PDB 96.3697% -77 - C5 -3FFI 10.8 ?
3 PsiBlast_PDB 96.3697% -69 - C5 -3C6U 10.0 ?
28 PsiBlast_CBE 96.3297% -70 - C5 -3LAM 7.4
40 PsiBlast_CBE 96.3097% -75 - C5 -3M8P 9.4 ?
4 PsiBlast_PDB 96.1797% -73 - C5 -3DRP 10.8
24 PsiBlast_CBE 96.0997% -77 - C5 -3MEC 9.2 POL_HV1H2
44 PsiBlast_CBE 95.9297% -72 - C5 -2JLE 8.0 ?
19 PsiBlast_PDB 95.8397% -73 - C5 -2YNF 9.1 ?
11 PsiBlast_PDB 95.7997% -73 - C5 -4NCG 10.5 ?
6 PsiBlast_PDB 95.7397% -72 - C5 -3I0S 8.8 ?
48 PsiBlast_CBE 95.6397% -77 - C5 -3ISN 2.7 ?
5 PsiBlast_PDB 95.5997% -73 - C5 -3I0R 6.4
20 PsiBlast_PDB 95.5897% -72 - C5 -3DRR 9.3 ?
50 PsiBlast_CBE 95.4797% -69 - C5 -1TV6 9.4
12 PsiBlast_PDB 95.4297% -72 - C5 -3DRS 7.3 ?
62 PsiBlast_CBE 95.1097% -76 - C5 -4B3Q 6.2 ?
63 PsiBlast_CBE 95.0697% -78 - C5 -4B3O 6.6
61 PsiBlast_CBE 90.4997% -73 - C5 -4B3P 6.9
60 PsiBlast_CBE 90.1397% -63 - C5 -3HVT 6.6 ?
75 Fugue 64.4593% -64 - C5 -1VRT 5.3