@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00102_PTN1_H: (2014-08-24 )
MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCREFFPNHQWVKEETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVRSRVVGGSLRGAQAASPAKGEPSLPEKDEDHALSYWKPFLVNMCVATVLTAGAYLCYRFLFNSNT

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACE_B_3(1PTT)
PTN1_HUMAN
[Raw transfer]




910_A_2(2QBR)
PTN1_HUMAN
[Raw transfer]




527_A_2(2QBP)
PTN1_HUMAN
[Raw transfer]




35B_A_9(2ZMM)
PTN1_HUMAN
[Raw transfer]




4B3_A_2(2QBQ)
PTN1_HUMAN
[Raw transfer]




024_A_2(2QBS)
PTN1_HUMAN
[Raw transfer]




410_A_2(2ZN7)
PTN1_HUMAN
[Raw transfer]




PTR_A_3(1PTY)
PTN1_HUMAN
[Raw transfer]




DBD_B_2(1L8G)
PTN1_HUMAN
[Raw transfer]




509_A_2(2H4K)
PTN1_HUMAN
[Raw transfer]




598_B_2(2B07)
PTN1_HUMAN
[Raw transfer]




PTR_A_4(1PTY)
PTN1_HUMAN
[Raw transfer]




694_A_2(2H4G)
PTN1_HUMAN
[Raw transfer]




SNA_A_4(1PXH)
PTN1_HUMAN
[Raw transfer]




GOL_A_6(1SUG)
PTN1_HUMAN
[Raw transfer]




1CG_A_2(4I8N)
PTN1_HUMAN
[Raw transfer]




512_A_2(2HB1)
PTN1_HUMAN
[Raw transfer]




GOL_A_6(3I80)
PTN1_HUMAN
[Raw transfer]




TPI_B_2(1BZC)
PTN1_HUMAN
[Raw transfer]




BPM_A_3(1AAX)
PTN1_HUMAN
[Raw transfer]




LZQ_A_2(3EB1)
PTN1_HUMAN
[Raw transfer]




B26_A_3(4GE6)
PTN9_HUMAN
[Raw transfer]




PHS_B_3(1PTV)
PTN1_HUMAN
[Raw transfer]




TYR_B_2(1PTV)
PTN1_HUMAN
[Raw transfer]




CHAIN_D_4(3ZMP)
?
[Raw transfer]

-

ACY_A_5(1EEN)
PTN1_HUMAN
[Raw transfer]




ZYZ_A_2(3D9C)
PTN1_HUMAN
[Raw transfer]




CHAIN_B_2(1PTT)
PTN1_HUMAN
[Raw transfer]

-

CHAIN_B_2(3I7Z)
PTN1_HUMAN
[Raw transfer]

-

CHAIN_B_3(1PTU)
PTN1_HUMAN
[Raw transfer]

-

CHAIN_I_2(1BZH)
PTN1_HUMAN
[Raw transfer]

-

CHAIN_B_2(1EEN)
PTN1_HUMAN
[Raw transfer]

-

EDO_A_4(2P6X)
PTN22_HUMAN
[Raw transfer]




CHAIN_B_2(1EEO)
PTN1_HUMAN
[Raw transfer]

-

CHAIN_C_3(3ZMP)
?
[Raw transfer]

-

NH2_B_5(1PTU)
PTN1_HUMAN
[Raw transfer]




55 PsiBlast_CBE 97.27100%-103 - C3 -2ZMM 7.3 PTN1_HUMAN
54 PsiBlast_CBE 97.12100%-102 - C3 -2ZN7 7.1 PTN1_HUMAN
43 PsiBlast_CBE 96.9699%-101 - C3 -1EEN 10.2 PTN1_HUMAN
15 PsiBlast_PDB 96.94100%-102 - C3 -1SUG 2.4 PTN1_HUMAN
21 PsiBlast_CBE 96.90100%-100 - C3 -3I80 2.4 PTN1_HUMAN
10 PsiBlast_PDB 96.80100%-102 - C3 -1PXH 10.3 PTN1_HUMAN
61 PsiBlast_CBE 96.73100%-100 - C3 -2H4K 6.1 PTN1_HUMAN
60 PsiBlast_CBE 96.69100%-103 - C3 -2HB1 5.0 PTN1_HUMAN
41 PsiBlast_CBE 96.6299%-100 - C3 -1PTY 6.7 PTN1_HUMAN
22 PsiBlast_CBE 96.56100%-105 - C3 -3I7Z 5.1 PTN1_HUMAN
57 PsiBlast_CBE 96.49100%-100 - C3 -2QBR 7.7 PTN1_HUMAN
42 PsiBlast_CBE 96.4799%-100 - C3 -1EEO 8.7 PTN1_HUMAN
53 PsiBlast_CBE 96.3899% -99 - C3 -1AAX 7.1 PTN1_HUMAN
63 PsiBlast_CBE 96.36100%-103 - C3 -2B07 7.7 PTN1_HUMAN
39 PsiBlast_CBE 96.2899%-103 - C3 -3QKQ - PTN1_HUMAN
59 PsiBlast_CBE 96.27100%-102 - C3 -2QBP 8.3 PTN1_HUMAN
58 PsiBlast_CBE 96.23100%-101 - C3 -2QBQ 7.8 PTN1_HUMAN
56 PsiBlast_CBE 96.18100%-100 - C3 -2QBS 8.1 PTN1_HUMAN
62 PsiBlast_CBE 95.98100%-100 - C3 -2H4G 6.1 PTN1_HUMAN
37 PsiBlast_CBE 95.82100%-104 - C3 -4I8N 6.2 PTN1_HUMAN
48 PsiBlast_CBE 95.5899%-100 - C3 -1BZC 8.7 PTN1_HUMAN
50 PsiBlast_CBE 95.5699%-100 - C3 -1PTU 7.2 PTN1_HUMAN
52 PsiBlast_CBE 95.4699% -99 - C3 -1PTV 3.2 PTN1_HUMAN
64 Fugue 95.3699%-107 - C3 -1BZH 4.0 PTN1_HUMAN
51 PsiBlast_CBE 95.2599% -98 - C3 -1PTT 7.3 PTN1_HUMAN
38 PsiBlast_CBE 95.1999% -98 - C3 -1L8G 6.8 PTN1_HUMAN
23 PsiBlast_CBE 93.68100%-111 - C3 -3EB1 3.1 PTN1_HUMAN
45 PsiBlast_CBE 92.8499%-112 - C3 -3ZMP 6.8 ?
25 PsiBlast_CBE 92.53100%-108 - C3 -3D9C 3.1 PTN1_HUMAN
44 PsiBlast_CBE 88.3699%-103 - C3 -3ZMP 8.5 ?
79 HHSearch 65.8040% -86 - C3 -4GE6 6.6 PTN9_HUMAN
77 HHSearch 59.7438% -84 - C3 -2P6X 3.6 PTN22_HUMAN