@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00102_PTN2_H: (2014-08-24 )
MPTTIEREFEELDTQRRWQPLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLSSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFMSVILVGAFVGWTLFFQQNAL

Atome Classification :

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

910_A_2(2QBR)
PTN1_HUMAN
[Raw transfer]



527_A_2(2QBP)
PTN1_HUMAN
[Raw transfer]



4B3_A_2(2QBQ)
PTN1_HUMAN
[Raw transfer]



35B_A_9(2ZMM)
PTN1_HUMAN
[Raw transfer]



024_A_2(2QBS)
PTN1_HUMAN
[Raw transfer]



902_A_2(2NT7)
PTN1_HUMAN
[Raw transfer]



410_A_2(2ZN7)
PTN1_HUMAN
[Raw transfer]



598_B_2(2B07)
PTN1_HUMAN
[Raw transfer]



509_A_2(2H4K)
PTN1_HUMAN
[Raw transfer]



694_A_2(2H4G)
PTN1_HUMAN
[Raw transfer]



1CG_A_2(4I8N)
PTN1_HUMAN
[Raw transfer]



982_B_2(2AZR)
PTN1_HUMAN
[Raw transfer]



512_A_2(2HB1)
PTN1_HUMAN
[Raw transfer]



521_A_2(2NTA)
PTN1_HUMAN
[Raw transfer]



B26_A_3(4GE6)
PTN9_HUMAN
[Raw transfer]



EDO_A_4(2P6X)
PTN22_HUMAN
[Raw transfer]



CHAIN_I_2(1BZH)
PTN1_HUMAN
[Raw transfer]
-
3 PsiBlast_PDB 93.4769%-103 - C1 -2NT7 8.3 PTN1_HUMAN
15 PsiBlast_PDB 92.9969%-104 - C1 -2ZMM 7.4 PTN1_HUMAN
11 PsiBlast_PDB 92.7869%-102 - C1 -2QBP 8.3 PTN1_HUMAN
14 PsiBlast_PDB 92.7469%-102 - C1 -2QBS 8.2 PTN1_HUMAN
4 PsiBlast_PDB 92.6669%-102 - C1 -2NTA 6.5 PTN1_HUMAN
12 PsiBlast_PDB 92.5869%-103 - C1 -2QBQ 7.9 PTN1_HUMAN
21 Fugue 92.5269%-108 - C1 -1BZH 4.0 PTN1_HUMAN
9 PsiBlast_PDB 92.3669%-102 - C1 -2H4K 6.2 PTN1_HUMAN
6 PsiBlast_PDB 92.3669%-103 - C1 -2AZR 5.6 PTN1_HUMAN
10 PsiBlast_PDB 92.2269%-103 - C1 -2HB1 5.0 PTN1_HUMAN
2 PsiBlast_PDB 92.1469%-104 - C1 -4I8N 6.2 PTN1_HUMAN
16 PsiBlast_PDB 92.0269%-103 - C1 -2ZN7 7.1 PTN1_HUMAN
8 PsiBlast_PDB 91.9769%-101 - C1 -2H4G 6.1 PTN1_HUMAN
13 PsiBlast_PDB 91.7369%-101 - C1 -2QBR 7.7 PTN1_HUMAN
7 PsiBlast_PDB 91.0969%-103 - C1 -2B07 7.7 PTN1_HUMAN
34 HHSearch 75.0240% -90 - C1 -4GE6 7.6 PTN9_HUMAN
35 HHSearch 69.4336% -84 - C1 -2P6X 3.6 PTN22_HUMAN