@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_GCR_HU: (2014-08-25 )
MDSKESLTPGREENPSSVLAQERGDVMDFYKTLRGGATVKVSASSPSLAVASQSDSKQRRLLVDFPKGSVSNAQQPDLSKAVSLSMGLYMGETETKVMGNDLGFPQQGQISLSSGETDLKLLEESIANLNRSTSVPENPKSSASTAVSAAPTEKEFPKTHSDVSSEQQHLKGQTGTNGGNVKLYTTDQSTFDILQDLEFSSGSPGKETNESPWRSDLLIDENCLLSPLAGEDDSFLLEGNSNEDCKPLILPDTKPKIKDNGDLVLSSPSNVTLPQVKTEKEDFIELCTPGVIKQEKLGTVYCQASFPGANIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPIFNVIPPIPVGSENWNRCQGSGDDNLTSLGTLNFPGRTVFSNGYSSPSMRPDVSSPPSSSSTATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATTGVSQETSENPGNKTIVPATLPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSTWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQSSANLLCFAPDLIINEQRMTLPCMYDQCKHMLYVSSELHRLQVSYEEYLCMKTLLLLSSVPKDGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHEVVENLLNYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEX_H_8(1M2Z)
GCR_HUMAN
[Raw transfer]




DEX_A_4(3MNE)

[Raw transfer]




DEX_I_9(1M2Z)

[Raw transfer]




DEX_L_12(1P93)

[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




DEX_B_6(3GN8)
?
[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




DAY_A_3(3BQD)

[Raw transfer]




DEX_A_4(3MNO)

[Raw transfer]




DEX_J_10(1P93)
GCR_HUMAN
[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




LSJ_A_3(4LSJ)
?
[Raw transfer]




DEX_I_9(1P93)
GCR_HUMAN
[Raw transfer]




486_B_8(3H52)
GCR_HUMAN
[Raw transfer]




GOL_A_6(3E7C)
GCR_HUMAN
[Raw transfer]




DEX_K_11(1P93)
GCR_HUMAN
[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




GW6_B_6(3CLD)

[Raw transfer]




GW6_A_5(3CLD)
GCR_HUMAN
[Raw transfer]




JZN_B_8(3K23)
GCR_HUMAN
[Raw transfer]




GOL_A_3(3MNP)

[Raw transfer]




GOL_A_3(3MNO)

[Raw transfer]




1CA_B_7(3RY9)
?
[Raw transfer]




GOL_A_3(3MNE)

[Raw transfer]




JZN_A_7(3K23)
GCR_HUMAN
[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




MOF_B_7(4E2J)
?
[Raw transfer]




486_A_7(3H52)
GCR_HUMAN
[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




486_B_2(1NHZ)

[Raw transfer]




GOL_A_5(4E2J)
?
[Raw transfer]




486_D_11(3H52)

[Raw transfer]




JZS_A_5(3K22)
GCR_HUMAN
[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




JZN_C_9(3K23)

[Raw transfer]




866_A_5(3E7C)
GCR_HUMAN
[Raw transfer]




DHT_A_3(1T7R)

[Raw transfer]




866_B_7(3E7C)

[Raw transfer]




STR_A_3(1A28)
PRGR_HUMAN
[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




486_C_10(3H52)
GCR_HUMAN
[Raw transfer]




CHAIN_H_8(1P93)

[Raw transfer]

-

JZR_A_6(3K22)
GCR_HUMAN
[Raw transfer]




HEZ_C_3(1NHZ)

[Raw transfer]




CHAIN_M_6(3H52)
GCR_HUMAN
[Raw transfer]

-

CHAIN_C_3(4E2J)
?
[Raw transfer]

-

CHAIN_E_4(3K23)
GCR_HUMAN
[Raw transfer]

-

CHAIN_D_4(3E7C)

[Raw transfer]

-

CHAIN_C_3(3GN8)
?
[Raw transfer]

-

MES_A_6(4FN9)
?
[Raw transfer]




CHAIN_B_2(1T7R)

[Raw transfer]

-

CHAIN_F_6(3K23)

[Raw transfer]

-

CHAIN_C_4(3CLD)

[Raw transfer]

-

CHAIN_N_5(3H52)
GCR_HUMAN
[Raw transfer]

-

CHAIN_F_4(1P93)
GCR_HUMAN
[Raw transfer]

-

CHAIN_E_4(3GN8)
?
[Raw transfer]

-

CHAIN_E_4(1M2Z)

[Raw transfer]

-

CHAIN_E_4(4E2J)
?
[Raw transfer]

-

12 PsiBlast_PDB 94.6493%-137 - C3 -3MNP 8.5
28 PsiBlast_CBE 94.5799%-143 - C3 -3E7C 8.8
3 PsiBlast_PDB 94.4999%-139 - C3 -1M2Z 8.3 GCR_HUMAN
6 PsiBlast_PDB 94.4899%-138 - C3 -3K22 9.0 GCR_HUMAN
24 PsiBlast_CBE 94.2099%-137 - C3 -1M2Z 8.5
21 PsiBlast_CBE 94.1398%-143 - C3 -1P93 7.5
22 PsiBlast_CBE 93.5398%-144 - C3 -1P93 7.5 GCR_HUMAN
7 PsiBlast_PDB 93.2699%-142 - C3 -3E7C 9.5 GCR_HUMAN
26 PsiBlast_CBE 93.2099%-137 - C3 -3K23 11.6 GCR_HUMAN
10 PsiBlast_PDB 92.9994%-137 - C3 -3MNE 8.4
9 PsiBlast_PDB 92.9398%-139 - C3 -3BQD 10.3
4 PsiBlast_PDB 92.8099%-140 - C3 -3CLD 9.7 GCR_HUMAN
11 PsiBlast_PDB 92.5394%-139 - C3 -3MNO 8.4
25 PsiBlast_CBE 92.3099%-136 - C3 -3K23 6.5
27 PsiBlast_CBE 91.9699%-139 - C3 -3CLD 9.7
2 PsiBlast_PDB 91.3498%-139 - C3 -1P93 7.6 GCR_HUMAN
23 PsiBlast_CBE 91.1098%-139 - C3 -1P93 7.8 GCR_HUMAN
5 PsiBlast_PDB 90.7599%-129 - C3 -3K23 6.9 GCR_HUMAN
8 PsiBlast_PDB 90.2298%-145 - C3 -4LSJ 9.3 ?
31 PsiBlast_CBE 87.8498%-131 - C3 -3H52 8.3 GCR_HUMAN
13 PsiBlast_PDB 86.7798%-129 - C3 -3H52 9.1 GCR_HUMAN
33 PsiBlast_CBE 86.6678%-128 - C3 -4E2J 8.9 ?
32 PsiBlast_CBE 86.5978%-130 - C3 -3GN8 8.6 ?
14 PsiBlast_PDB 86.5878%-131 - C3 -3GN8 8.7 ?
15 PsiBlast_PDB 86.3478%-131 - C3 -4E2J 9.3 ?
29 PsiBlast_CBE 85.9398%-142 - C3 -3H52 6.0
16 PsiBlast_PDB 85.6672%-129 - C3 -3RY9 8.8 ?
34 PsiBlast_CBE 84.9372%-131 - C3 -3RY9 8.5 ?
1 PsiBlast_PDB 84.8098%-130 - C3 -1NHZ 9.9
78 HHSearch 83.7355%-129 - C3 -3VHV 8.6
30 PsiBlast_CBE 83.2998%-134 - C3 -3H52 5.2 GCR_HUMAN
20 PsiBlast_PDB 83.2563%-126 - C3 -4FN9 7.2 ?
17 PsiBlast_PDB 82.1565%-133 - C3 -2Q1H 7.9 ?
72 HHSearch 81.3954%-131 - C3 -3VHU 9.2
71 HHSearch 78.8648%-120 - C3 -1T7R 7.0
75 HHSearch 78.0153%-122 * C3 *1SQN 6.2 PRGR_HUMAN
62 Fugue 73.4748%-117 - C3 -1A28 6.8 PRGR_HUMAN