@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_GCR_MO: (2014-08-25 )
MDSKESLAPPGRDEVPSSLLGRGRGSVMDLYKTLRGGATVKVSASSPSVAAASQADSKQQRILLDFSKGSASNAQQQQQQQQPQPDLSKAVSLSMGLYMGETETKVMGNDLGYPQQGQLGLSSGETDFRLLEESIANLNRSTSRPENPKSSTPAAGCATPTEKEFPQTHSDPSSEQQNRKSQPGTNGGSVKLYTTDQSTFDILQDLEFSAGSPGKETNESPWRSDLLIDENLLSPLAGEDDPFLLEGDVNEDCKPLILPDTKPKIQDTGDTILSSPSSVALPQVKTEKDDFIELCTPGVIKQEKLGPVYCQASFSGTNIIGNKMSAISVHGVSTSGGQMYHYDMNTASLSQQQDQKPVFNVIPPIPVGSENWNRCQGSGEDNLTSLGAMNFAGRSVFSNGYSSPGMRPDVSSPPSSSSTATGPPPKLCLVCSDEASVCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGIQQATAGVSQDTSENANKTIVPAALPQLTPTLVSLLEVIEPEVLYAGYDSSVPDSAWRIMTTLNMLGGRQVIAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYRQASGNLLCFAPDLIINEQRMTLPCMYDQCKHMLFISTELQRLQVSYEEYLCMKTLLLLSSVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSYCFQTFLDKSMSIEFPEMLAEIITNQIPKYSNGNIKKLLFHQK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DEX_H_8(1M2Z)
GCR_HUMAN
[Raw transfer]




DEX_A_4(3MNE)

[Raw transfer]




DEX_L_12(1P93)

[Raw transfer]




DEX_A_4(3MNO)

[Raw transfer]




DEX_I_9(1M2Z)

[Raw transfer]




DEX_A_4(3MNP)

[Raw transfer]




DEX_B_6(3GN8)
?
[Raw transfer]




DEX_A_5(3GN8)
?
[Raw transfer]




DAY_A_3(3BQD)

[Raw transfer]




DEX_J_10(1P93)
GCR_HUMAN
[Raw transfer]




MOF_A_6(4E2J)
?
[Raw transfer]




DEX_I_9(1P93)
GCR_HUMAN
[Raw transfer]




GW6_B_6(3CLD)

[Raw transfer]




AS4_A_4(2Q1H)
?
[Raw transfer]




LSJ_A_3(4LSJ)
?
[Raw transfer]




GOL_A_3(3MNP)

[Raw transfer]




DEX_K_11(1P93)
GCR_HUMAN
[Raw transfer]




486_B_8(3H52)
GCR_HUMAN
[Raw transfer]




GOL_A_3(3MNE)

[Raw transfer]




1CA_B_7(3RY9)
?
[Raw transfer]




1CA_A_4(3RY9)
?
[Raw transfer]




GOL_A_3(3MNO)

[Raw transfer]




GW6_A_5(3CLD)
GCR_HUMAN
[Raw transfer]




MOF_B_7(4E2J)
?
[Raw transfer]




JZN_B_8(3K23)
GCR_HUMAN
[Raw transfer]




GOL_A_6(3E7C)
GCR_HUMAN
[Raw transfer]




JZN_A_7(3K23)
GCR_HUMAN
[Raw transfer]




486_A_7(3H52)
GCR_HUMAN
[Raw transfer]




STR_A_3(4FN9)
?
[Raw transfer]




486_B_2(1NHZ)

[Raw transfer]




486_D_11(3H52)

[Raw transfer]




GOL_A_5(4E2J)
?
[Raw transfer]




JZS_A_5(3K22)
GCR_HUMAN
[Raw transfer]




DHT_A_3(1T7R)

[Raw transfer]




LD1_A_2(3VHV)

[Raw transfer]




866_A_5(3E7C)
GCR_HUMAN
[Raw transfer]




JZN_C_9(3K23)

[Raw transfer]




866_B_7(3E7C)

[Raw transfer]




SNL_A_2(3VHU)

[Raw transfer]




STR_A_3(1A28)
PRGR_HUMAN
[Raw transfer]




CHAIN_H_8(1P93)

[Raw transfer]

-

486_C_10(3H52)
GCR_HUMAN
[Raw transfer]




NDR_C_3(1SQN)
PRGR_HUMAN
[Raw transfer]




JZR_A_6(3K22)
GCR_HUMAN
[Raw transfer]




HEZ_C_3(1NHZ)

[Raw transfer]




CHAIN_C_3(4E2J)
?
[Raw transfer]

-

MES_A_6(4FN9)
?
[Raw transfer]




CHAIN_M_6(3H52)
GCR_HUMAN
[Raw transfer]

-

CHAIN_D_4(3E7C)

[Raw transfer]

-

CHAIN_C_3(3GN8)
?
[Raw transfer]

-

CHAIN_E_4(3K23)
GCR_HUMAN
[Raw transfer]

-

CHAIN_B_2(1T7R)

[Raw transfer]

-

CHAIN_N_5(3H52)
GCR_HUMAN
[Raw transfer]

-

CHAIN_C_4(3CLD)

[Raw transfer]

-

CHAIN_F_4(1P93)
GCR_HUMAN
[Raw transfer]

-

CHAIN_F_6(3K23)

[Raw transfer]

-

CHAIN_E_4(3GN8)
?
[Raw transfer]

-

CHAIN_E_4(1M2Z)

[Raw transfer]

-

CHAIN_E_4(4E2J)
?
[Raw transfer]

-

5 PsiBlast_PDB 89.0498%-140 - C4 -3MNP 8.5
3 PsiBlast_PDB 87.4599%-140 - C4 -3MNE 8.4
6 PsiBlast_PDB 86.9794%-141 - C4 -1M2Z 8.3 GCR_HUMAN
4 PsiBlast_PDB 86.8498%-142 - C4 -3MNO 8.4
24 PsiBlast_CBE 86.6794%-139 - C4 -1M2Z 8.5
10 PsiBlast_PDB 86.4094%-141 - C4 -3K22 9.0 GCR_HUMAN
25 PsiBlast_CBE 86.3394%-146 - C4 -3E7C 8.5
7 PsiBlast_PDB 85.4794%-144 - C4 -3E7C 9.5 GCR_HUMAN
12 PsiBlast_PDB 85.4494%-141 - C4 -3BQD 10.3
27 PsiBlast_CBE 85.1494%-140 - C4 -3K23 11.6 GCR_HUMAN
21 PsiBlast_CBE 85.1192%-146 - C4 -1P93 7.5
22 PsiBlast_CBE 84.5692%-147 - C4 -1P93 7.5 GCR_HUMAN
8 PsiBlast_PDB 84.2794%-142 - C4 -3CLD 9.7 GCR_HUMAN
28 PsiBlast_CBE 83.9394%-141 - C4 -3CLD 9.7
2 PsiBlast_PDB 83.2292%-141 - C4 -1P93 7.6 GCR_HUMAN
26 PsiBlast_CBE 83.1194%-137 - C4 -3K23 6.5
23 PsiBlast_CBE 83.1092%-141 - C4 -1P93 7.8 GCR_HUMAN
9 PsiBlast_PDB 82.9194%-130 - C4 -3K23 6.9 GCR_HUMAN
11 PsiBlast_PDB 82.0694%-147 - C4 -4LSJ 9.3 ?
14 PsiBlast_PDB 80.3578%-134 - C4 -3GN8 8.7 ?
31 PsiBlast_CBE 80.2393%-132 - C4 -3H52 8.3 GCR_HUMAN
32 PsiBlast_CBE 79.8578%-134 - C4 -3GN8 8.6 ?
33 PsiBlast_CBE 79.7878%-131 - C4 -4E2J 8.9 ?
15 PsiBlast_PDB 79.7778%-134 - C4 -4E2J 9.3 ?
29 PsiBlast_CBE 79.3793%-143 - C4 -3H52 6.0
13 PsiBlast_PDB 79.0293%-131 - C4 -3H52 9.1 GCR_HUMAN
16 PsiBlast_PDB 78.6872%-132 - C4 -3RY9 8.8 ?
79 HHSearch 78.1756%-131 - C4 -3VHV 8.6
34 PsiBlast_CBE 78.0372%-134 - C4 -3RY9 8.5 ?
73 HHSearch 77.4955%-134 - C4 -3VHU 9.2
1 PsiBlast_PDB 77.2092%-133 - C4 -1NHZ 9.9
30 PsiBlast_CBE 77.0393%-137 - C4 -3H52 5.2 GCR_HUMAN
20 PsiBlast_PDB 76.9064%-128 - C4 -4FN9 7.2 ?
17 PsiBlast_PDB 76.5565%-136 - C4 -2Q1H 7.9 ?
76 HHSearch 72.5455%-125 * C4 *1SQN 6.2 PRGR_HUMAN
72 HHSearch 72.2747%-123 - C4 -1T7R 7.0
61 Fugue 68.4649%-121 - C4 -1A28 6.8 PRGR_HUMAN