@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_NR1H2_: (2014-08-25 )
MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

965_D_7(1PQ6)
NR1H2_HUMAN
[Raw transfer]



LX2_D_8(3FC6)
NR1H3_MOUSE
[Raw transfer]



LX2_B_6(3FC6)
NR1H3_MOUSE
[Raw transfer]



965_A_5(1PQ6)
NR1H2_HUMAN
[Raw transfer]



61X_D_7(3KFC)
NR1H2_HUMAN
[Raw transfer]



61X_A_5(3KFC)
NR1H2_HUMAN
[Raw transfer]



965_B_6(1PQ6)
NR1H2_HUMAN
[Raw transfer]



61X_B_6(3KFC)
NR1H2_HUMAN
[Raw transfer]



44B_H_8(1PQ9)
NR1H2_HUMAN
[Raw transfer]



444_H_8(1PQC)
NR1H2_HUMAN
[Raw transfer]



965_A_3(3IPQ)
NR1H3_HUMAN
[Raw transfer]



O40_B_6(3IPU)
NR1H3_HUMAN
[Raw transfer]



LO2_D_8(3FAL)
NR1H3_MOUSE
[Raw transfer]



LO2_B_6(3FAL)
NR1H3_MOUSE
[Raw transfer]



CO1_E_5(1P8D)
NR1H2_HUMAN
[Raw transfer]



CO1_F_6(1P8D)
NR1H2_HUMAN
[Raw transfer]



O40_A_5(3IPU)
NR1H3_HUMAN
[Raw transfer]



0KS_A_5(4DK7)
NR1H2_HUMAN
[Raw transfer]



O90_A_6(3IPS)
NR1H3_HUMAN
[Raw transfer]



G58_A_3(3L0E)
NR1H2_HUMAN
[Raw transfer]



444_E_5(1PQC)
NR1H2_HUMAN
[Raw transfer]



444_A_2(1UPV)
NR1H2_HUMAN
[Raw transfer]



444_G_7(1PQC)
NR1H2_HUMAN
[Raw transfer]



444_A_2(1UPW)
NR1H2_HUMAN
[Raw transfer]



444_F_6(1PQC)
NR1H2_HUMAN
[Raw transfer]



O90_B_7(3IPS)
NR1H3_HUMAN
[Raw transfer]



44B_L_12(1PQ9)
NR1H2_HUMAN
[Raw transfer]



444_E_5(1UHL)
NR1H3_HUMAN
[Raw transfer]



0KT_A_5(4DK8)
NR1H2_HUMAN
[Raw transfer]



0KT_C_11(4DK8)
NR1H2_HUMAN
[Raw transfer]



44B_F_6(1PQ9)
NR1H2_HUMAN
[Raw transfer]



44B_J_10(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BNS_E_5(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BNS_G_7(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BNS_I_9(1PQ9)
NR1H2_HUMAN
[Raw transfer]



BNS_K_11(1PQ9)
NR1H2_HUMAN
[Raw transfer]



IPA_B_9(1PQ6)
NR1H2_HUMAN
[Raw transfer]
30 PsiBlast_CBE 75.71100%-130 - C6 -1PQ6 11.9 NR1H2_HUMAN
10 PsiBlast_PDB 75.7197%-119 - C6 -3L0E 10.3 NR1H2_HUMAN
4 PsiBlast_PDB 75.39100%-123 - C6 -1PQ6 11.7 NR1H2_HUMAN
31 PsiBlast_CBE 75.17100%-116 - C6 -1PQ6 12.6 NR1H2_HUMAN
24 PsiBlast_CBE 74.80100%-129 - C6 -1PQC 3.4 NR1H2_HUMAN
33 PsiBlast_CBE 74.6798%-120 - C6 -4DK8 8.4 NR1H2_HUMAN
23 PsiBlast_CBE 74.60100%-117 - C6 -3KFC 10.4 NR1H2_HUMAN
25 PsiBlast_CBE 74.44100%-118 - C6 -1PQC 8.0 NR1H2_HUMAN
27 PsiBlast_CBE 74.43100%-130 - C6 -1PQ9 6.1 NR1H2_HUMAN
6 PsiBlast_PDB 74.36100%-118 - C6 -1PQC 7.8 NR1H2_HUMAN
11 PsiBlast_PDB 74.3396%-120 - C6 -4DK7 6.6 NR1H2_HUMAN
2 PsiBlast_PDB 74.30100%-122 - C6 -1UPV 6.4 NR1H2_HUMAN
32 PsiBlast_CBE 74.2999%-112 - C6 -1P8D 9.2 NR1H2_HUMAN
8 PsiBlast_PDB 74.2699%-113 - C6 -1P8D 9.1 NR1H2_HUMAN
7 PsiBlast_PDB 74.25100%-119 - C6 -3KFC 10.3 NR1H2_HUMAN
29 PsiBlast_CBE 74.21100%-112 - C6 -1PQ9 5.9 NR1H2_HUMAN
26 PsiBlast_CBE 74.08100%-112 - C6 -1PQC 8.4 NR1H2_HUMAN
22 PsiBlast_CBE 74.07100%-115 - C6 -3KFC 9.4 NR1H2_HUMAN
28 PsiBlast_CBE 74.06100%-115 - C6 -1PQ9 5.8 NR1H2_HUMAN
9 PsiBlast_PDB 74.0298%-117 - C6 -4DK8 8.8 NR1H2_HUMAN
3 PsiBlast_PDB 73.53100%-117 - C6 -1UPW 5.9 NR1H2_HUMAN
5 PsiBlast_PDB 73.32100%-117 - C6 -1PQ9 5.9 NR1H2_HUMAN
13 PsiBlast_PDB 71.0277%-116 - C6 -3FC6 13.3 NR1H3_MOUSE
37 PsiBlast_CBE 69.9577%-110 - C6 -3FC6 13.1 NR1H3_MOUSE
14 PsiBlast_PDB 69.5777%-115 - C6 -3FAL 9.6 NR1H3_MOUSE
38 PsiBlast_CBE 69.3177%-114 - C6 -3FAL 10.0 NR1H3_MOUSE
16 PsiBlast_PDB 68.9476%-121 - C6 -3IPS 9.7 NR1H3_HUMAN
15 PsiBlast_PDB 68.9076%-119 - C6 -3IPQ 12.6 NR1H3_HUMAN
40 PsiBlast_CBE 68.8376%-119 - C6 -3IPS 8.5 NR1H3_HUMAN
39 PsiBlast_CBE 68.6576%-110 - C6 -3IPU 8.9 NR1H3_HUMAN
17 PsiBlast_PDB 68.1776%-111 - C6 -3IPU 9.0 NR1H3_HUMAN
18 PsiBlast_PDB 64.2678%-117 - C6 -1UHL 5.8 NR1H3_HUMAN