@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_PPARG_: (2014-08-26 )
MGETLGDPPVDPEHGAFADALPMSTSQEITMVDTEMPFWPTNFGISSVDLSVMDDHSHSFDIKPFTTVDFSSISAPHYEDIPFTRADPMVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNRPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYAKNIPGFINLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKVLQKMTDLRQIVTEHVQLLHVIKKTETDMSLHPLLQEIYKDLY

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EK8_A_3(3VSP)
PPARG_HUMAN
[Raw transfer]




EK1_A_3(3VSO)
PPARG_HUMAN
[Raw transfer]




DRJ_C_3(2I4J)
PPARG_HUMAN
[Raw transfer]




M7R_A_3(3AN4)
PPARG_HUMAN
[Raw transfer]




AZ2_C_3(1I7I)
PPARG_HUMAN
[Raw transfer]




M7S_A_3(3AN3)
PPARG_HUMAN
[Raw transfer]




PTG_A_3(2ZVT)
PPARG_HUMAN
[Raw transfer]




XCX_A_3(3R8I)
PPARG_HUMAN
[Raw transfer]




AZ2_D_4(1I7I)
PPARG_HUMAN
[Raw transfer]




TLS_A_3(3VN2)
PPARG_HUMAN
[Raw transfer]




OCR_A_3(2ZK4)
PPARG_HUMAN
[Raw transfer]




YFE_A_3(2YFE)
PPARG_HUMAN
[Raw transfer]




YFE_B_4(2YFE)
PPARG_HUMAN
[Raw transfer]




LRG_A_3(3D6D)
PPARG_HUMAN
[Raw transfer]




NRO_A_3(2ZK5)
PPARG_HUMAN
[Raw transfer]




DRH_C_3(2I4P)
PPARG_HUMAN
[Raw transfer]




C08_B_4(2ZK6)
PPARG_HUMAN
[Raw transfer]




DRH_A_3(2I4Z)
PPARG_HUMAN
[Raw transfer]




S44_A_3(2ZNO)
PPARG_HUMAN
[Raw transfer]




S44_B_4(2ZNO)
PPARG_HUMAN
[Raw transfer]




C08_A_3(2ZK6)
PPARG_HUMAN
[Raw transfer]




ZXG_A_3(3PBA)
PPARG_HUMAN
[Raw transfer]




YFD_A_3(4A4V)
PPARG_HUMAN
[Raw transfer]




RRG_A_3(4E4K)
PPARG_HUMAN
[Raw transfer]




J35_A_3(3VJH)
PPARG_HUMAN
[Raw transfer]




YFD_B_4(4A4V)
PPARG_HUMAN
[Raw transfer]




NRO_B_4(2ZK5)
PPARG_HUMAN
[Raw transfer]




DKD_A_3(3HO0)
PPARG_HUMAN
[Raw transfer]




IMN_A_4(3ADS)
PPARG_HUMAN
[Raw transfer]




13M_A_2(3VI8)
PPARA_HUMAN
[Raw transfer]




ZZH_A_3(3HOD)
PPARG_HUMAN
[Raw transfer]




RRH_A_3(4E4Q)
PPARG_HUMAN
[Raw transfer]




LRG_A_3(3B3K)
PPARG_HUMAN
[Raw transfer]




GRR_A_3(3CDS)
PPARG_HUMAN
[Raw transfer]




IMN_B_5(3ADX)
PPARG_HUMAN
[Raw transfer]




PTG_B_4(2ZVT)
PPARG_HUMAN
[Raw transfer]




IMN_B_5(3ADS)
PPARG_HUMAN
[Raw transfer]




OCX_A_3(2ZK3)
PPARG_HUMAN
[Raw transfer]




IMN_A_4(3ADX)
PPARG_HUMAN
[Raw transfer]




YRG_A_3(3CDP)
PPARG_HUMAN
[Raw transfer]




HID_A_3(3ADT)
PPARG_HUMAN
[Raw transfer]




YFB_B_4(4A4W)
PPARG_HUMAN
[Raw transfer]




PTG_A_3(2ZK1)
PPARG_HUMAN
[Raw transfer]




OCR_A_4(3ADW)
PPARG_HUMAN
[Raw transfer]




GW9_D_12(3E00)
PPARG_HUMAN
[Raw transfer]




PTG_A_4(2ZK2)
PPARG_HUMAN
[Raw transfer]




PLB_D_12(3DZU)
PPARG_HUMAN
[Raw transfer]




OCR_B_4(2ZK4)
PPARG_HUMAN
[Raw transfer]




XPT_B_4(3PO9)
PPARG_HUMAN
[Raw transfer]




XDI_A_3(3OSW)
PPARG_HUMAN
[Raw transfer]




IMN_A_3(3ADS)
PPARG_HUMAN
[Raw transfer]




PTG_B_4(2ZK1)
PPARG_HUMAN
[Raw transfer]




OCX_B_4(2ZK3)
PPARG_HUMAN
[Raw transfer]




DKA_A_3(3U9Q)
PPARG_HUMAN
[Raw transfer]




XDH_A_3(3OSI)
PPARG_HUMAN
[Raw transfer]




STL_A_3(4JAZ)
?
[Raw transfer]




XPT_A_3(3PO9)
PPARG_HUMAN
[Raw transfer]




OCR_B_5(3ADW)
PPARG_HUMAN
[Raw transfer]




MYI_A_3(3ADW)
PPARG_HUMAN
[Raw transfer]




MYI_B_5(3ADU)
PPARG_HUMAN
[Raw transfer]




MYI_A_3(3ADU)
PPARG_HUMAN
[Raw transfer]




NRO_A_3(3ADX)
PPARG_HUMAN
[Raw transfer]




PGO_B_5(3PO9)
PPARG_HUMAN
[Raw transfer]




SRO_A_4(3ADV)
PPARG_HUMAN
[Raw transfer]




SRO_A_3(3ADV)
PPARG_HUMAN
[Raw transfer]




SRO_B_5(3ADV)
PPARG_HUMAN
[Raw transfer]




2 PsiBlast_PDB 99.6098%-130 - C6 -3E00 4.2 PPARG_HUMAN
1 PsiBlast_PDB 97.1298%-128 - C6 -3DZU 6.7 PPARG_HUMAN
11 PsiBlast_PDB 85.0598%-133 - C6 -4A4V 6.7 PPARG_HUMAN
10 PsiBlast_PDB 84.4598%-132 - C6 -2YFE 7.2 PPARG_HUMAN
59 PsiBlast_CBE 84.3898%-137 - C6 -3OSW 7.8 PPARG_HUMAN
30 PsiBlast_CBE 84.2398%-130 - C6 -3VSO 9.3 PPARG_HUMAN
53 PsiBlast_CBE 84.1398%-133 - C6 -3PBA 7.7 PPARG_HUMAN
7 PsiBlast_PDB 84.0998%-128 - C6 -3ADW 5.0 PPARG_HUMAN
29 PsiBlast_CBE 84.0098%-129 - C6 -3VSP 10.8 PPARG_HUMAN
56 PsiBlast_CBE 83.9998%-136 - C6 -3VN2 10.2 PPARG_HUMAN
47 PsiBlast_CBE 83.8498%-127 - C6 -2ZK2 4.6 PPARG_HUMAN
31 PsiBlast_CBE 83.8498%-133 - C6 -3VJH 7.1 PPARG_HUMAN
40 PsiBlast_CBE 83.7598%-128 - C6 -2ZK6 7.5 PPARG_HUMAN
51 PsiBlast_CBE 83.7498%-134 - C6 -3PO9 4.6 PPARG_HUMAN
60 PsiBlast_CBE 83.7298%-132 - C6 -3OSI 7.7 PPARG_HUMAN
6 PsiBlast_PDB 83.4898%-132 - C6 -3ADV 4.0 PPARG_HUMAN
42 PsiBlast_CBE 83.4798%-126 - C6 -2ZK5 5.1 PPARG_HUMAN
3 PsiBlast_PDB 83.4798%-132 - C6 -3ADS 7.5 PPARG_HUMAN
8 PsiBlast_PDB 83.4298%-127 - C6 -3ADX 7.9 PPARG_HUMAN
73 HHSearch 83.3999%-133 * C6 *3U9Q 4.9 PPARG_HUMAN
35 PsiBlast_CBE 83.2898%-129 - C6 -3AN4 10.9 PPARG_HUMAN
36 PsiBlast_CBE 83.2598%-129 - C6 -3AN3 10.0 PPARG_HUMAN
4 PsiBlast_PDB 83.2498%-131 - C6 -3ADT 4.0 PPARG_HUMAN
58 PsiBlast_CBE 83.2297%-128 - C6 -2ZVT 6.0 PPARG_HUMAN
16 PsiBlast_PDB 83.2298%-126 - C6 -2I4P 7.5 PPARG_HUMAN
34 PsiBlast_CBE 83.1898%-129 - C6 -3CDP 5.3 PPARG_HUMAN
5 PsiBlast_PDB 83.1398%-134 - C6 -3ADU 3.7 PPARG_HUMAN
15 PsiBlast_PDB 83.0898%-131 - C6 -2I4J 7.5 PPARG_HUMAN
44 PsiBlast_CBE 83.0398%-124 - C6 -2ZK4 5.4 PPARG_HUMAN
49 PsiBlast_CBE 82.9898%-125 - C6 -2ZK1 4.8 PPARG_HUMAN
17 PsiBlast_PDB 82.8998%-128 - C6 -2I4Z 6.6 PPARG_HUMAN
32 PsiBlast_CBE 82.8398%-131 - C6 -3HOD 6.3 PPARG_HUMAN
55 PsiBlast_CBE 82.8198%-135 - C6 -1I7I 8.1 PPARG_HUMAN
46 PsiBlast_CBE 82.6898%-121 - C6 -2ZK3 5.3 PPARG_HUMAN
38 PsiBlast_CBE 82.6198%-127 - C6 -2ZNO 8.3 PPARG_HUMAN
9 PsiBlast_PDB 82.5698%-126 - C6 -3R8I 5.9 PPARG_HUMAN
12 PsiBlast_PDB 82.3698%-125 - C6 -4E4K 4.7 PPARG_HUMAN
20 PsiBlast_PDB 82.3498%-130 - C6 -3D6D 5.9 PPARG_HUMAN
19 PsiBlast_PDB 82.2298%-130 - C6 -3CDS 5.7 PPARG_HUMAN
33 PsiBlast_CBE 82.1298%-128 - C6 -3HO0 5.5 PPARG_HUMAN
21 PsiBlast_CBE 82.1298%-130 - C6 -4A4W 8.7 PPARG_HUMAN
18 PsiBlast_PDB 82.0698%-125 - C6 -3B3K 7.8 PPARG_HUMAN
22 PsiBlast_CBE 82.0098%-130 - C6 -4A4V 5.9 PPARG_HUMAN
14 PsiBlast_PDB 81.8898%-121 - C6 -4JAZ 6.2 ?
28 PsiBlast_CBE 81.7298%-128 - C6 -2YFE 6.9 PPARG_HUMAN
13 PsiBlast_PDB 81.5298%-127 - C6 -4E4Q 5.5 PPARG_HUMAN
50 PsiBlast_CBE 80.9598%-137 - C6 -3PO9 4.1 PPARG_HUMAN
37 PsiBlast_CBE 80.4998%-128 - C6 -2ZNO 8.5 PPARG_HUMAN
24 PsiBlast_CBE 80.3398%-130 - C6 -3ADW 5.1 PPARG_HUMAN
26 PsiBlast_CBE 80.2698%-124 - C6 -3ADU 4.2 PPARG_HUMAN
23 PsiBlast_CBE 79.9698%-130 - C6 -3ADX 6.5 PPARG_HUMAN
54 PsiBlast_CBE 79.7398%-128 - C6 -1I7I 8.0 PPARG_HUMAN
25 PsiBlast_CBE 79.7098%-132 - C6 -3ADV 3.8 PPARG_HUMAN
45 PsiBlast_CBE 79.6098%-127 - C6 -2ZK3 5.6 PPARG_HUMAN
57 PsiBlast_CBE 79.5197%-127 - C6 -2ZVT 5.9 PPARG_HUMAN
27 PsiBlast_CBE 79.4898%-133 - C6 -3ADS 6.7 PPARG_HUMAN
48 PsiBlast_CBE 79.4298%-126 - C6 -2ZK1 5.3 PPARG_HUMAN
43 PsiBlast_CBE 79.4298%-123 - C6 -2ZK4 5.2 PPARG_HUMAN
41 PsiBlast_CBE 79.2298%-123 - C6 -2ZK5 5.0 PPARG_HUMAN
39 PsiBlast_CBE 79.1698%-126 - C6 -2ZK6 7.6 PPARG_HUMAN
76 HHSearch 70.1958%-111 - C6 -3VI8 8.9 PPARA_HUMAN