@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00105_RORG_H: (2014-08-26 )
MDRAPQRQHRASRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQRCNAAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQKQLQQRQQQQQEPVVKTPPAGAQGADTLTYTLGLPDGQLPLGSSPDLPEASACPPGLLKASGSGPSYSNNLAKAGLNGASCHLEYSPERGKAEGRESFYSTGSQLTPDRCGLRFEEHRHPGLGELGQGPDSYGSPSFRSTPEAPYASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIFSREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAMEVVLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALYTALVLINAHRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHVERLQIFQHLHPIVVQAAFPPLYKELFSTETESPVGLSK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NBH_B_7(4NIE)

[Raw transfer]



NBH_A_5(4NIE)
RORG_HUMAN
[Raw transfer]



ARL_A_3(1NQ7)
RORB_RAT
[Raw transfer]



ARL_A_3(1NQ7)
RORB_RAT
[Raw transfer]



HC3_A_5(3L0L)
RORG_HUMAN
[Raw transfer]



HC3_A_5(3L0L)
RORG_HUMAN
[Raw transfer]



HC3_B_6(3L0L)

[Raw transfer]



C3S_B_2(1S0X)

[Raw transfer]



DGX_B_4(3B0W)

[Raw transfer]



HC9_A_3(3L0J)

[Raw transfer]



REA_C_3(1N4H)
RORB_RAT
[Raw transfer]



HC2_A_3(3KYT)

[Raw transfer]



DGX_A_3(3B0W)
RORG_HUMAN
[Raw transfer]



CLR_B_2(1N83)

[Raw transfer]



STE_C_3(1K4W)
RORB_RAT
[Raw transfer]



444_B_4(4NB6)

[Raw transfer]



444_A_3(4NB6)
RORG_HUMAN
[Raw transfer]



LMU_A_3(1FCY)
RARG_HUMAN
[Raw transfer]



NACID_C_1(1DSZ)

[Raw transfer]
-
NACID_C_1(1A6Y)
NR1D1_HUMAN
[Raw transfer]
-
CHAIN_C_2(3L0L)
RORG_HUMAN
[Raw transfer]
-
CHAIN_C_3(4NIE)

[Raw transfer]
-
CHAIN_C_2(3L0L)

[Raw transfer]
-
NACID_C_1(1HLZ)
NR1D1_HUMAN
[Raw transfer]
-
CHAIN_D_4(4NIE)

[Raw transfer]
-
NACID_C_1(1GA5)
?
[Raw transfer]
-
DMX_A_6(4NIE)

[Raw transfer]



NACID_D_2(1GA5)
?
[Raw transfer]
-
CHAIN_B_2(1NQ7)
RORB_RAT
[Raw transfer]
-
CHAIN_E_4(3L0L)

[Raw transfer]
-
CHAIN_B_2(3N00)
NR1D1_HUMAN
[Raw transfer]
-
4 PsiBlast_PDB 92.95100%-144 - C3 -3KYT 8.3
21 PsiBlast_CBE 92.70100%-136 - C3 -3L0L 8.7
38 HHSearch 92.62100%-141 - C3 -3L0L 8.9 RORG_HUMAN
22 PsiBlast_CBE 92.3399%-142 - C3 -4NIE 9.4
5 PsiBlast_PDB 91.57100%-142 - C3 -3L0J 8.7
23 PsiBlast_CBE 85.86100%-139 - C3 -4NB6 6.5
3 PsiBlast_PDB 85.35100%-139 - C3 -4NB6 6.4 RORG_HUMAN
2 PsiBlast_PDB 84.1499%-147 - C3 -4NIE 9.1 RORG_HUMAN
6 PsiBlast_PDB 83.64100%-136 - C3 -3B0W 8.8 RORG_HUMAN
24 PsiBlast_CBE 83.44100%-135 - C3 -3B0W 9.5
10 PsiBlast_PDB 79.5950%-140 - C3 -1K4W 4.7 RORB_RAT
40 HHSearch 79.5850%-140 - C3 -1NQ7 7.3 RORB_RAT
9 PsiBlast_PDB 79.4550%-138 - C3 -1N4H 6.8 RORB_RAT
7 PsiBlast_PDB 79.2652%-138 - C3 -1N83 5.1
8 PsiBlast_PDB 79.2452%-135 - C3 -1S0X 8.1
43 HHSearch 63.5634%-141 - C3 -3N00 10.5 NR1D1_HUMAN
19 PsiBlast_PDB 34.8757% -84 - C3 -1HLZ 6.9 NR1D1_HUMAN
56 HHSearch 34.0159% -65 - C3 -1A6Y 5.8 NR1D1_HUMAN
20 PsiBlast_PDB 33.6457% -65 - C3 -1GA5 7.6 ?
57 HHSearch 32.6359% -58 - C3 -1DSZ 4.9