@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00121_TPIS_T: (2014-08-28 )
MASKPQPIAAANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNAITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCVGETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAKNARTLYQMRDINGFLVGGASLKPEFVEIIEATK

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2PG_B_3(4TIM)
TPIS_TRYBB
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




PGA_B_4(1KV5)
TPIS_TRYBB
[Raw transfer]




PGH_A_2(2VXN)
TPIS_LEIME
[Raw transfer]




PGA_A_3(2J27)
TPIS_TRYBB
[Raw transfer]




PGA_A_3(1KV5)
TPIS_TRYBB
[Raw transfer]




PGA_A_5(2V2C)
TPIS_TRYBB
[Raw transfer]




3PG_C_3(1IIH)
TPIS_TRYBB
[Raw transfer]




PGA_A_2(1N55)
TPIS_LEIME
[Raw transfer]




PGA_C_3(1QDS)
TPIS_LEIME
[Raw transfer]




PGH_C_5(1TRD)
TPIS_TRYBB
[Raw transfer]




PGA_B_4(2J27)
TPIS_TRYBB
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




G3P_B_3(6TIM)
TPIS_TRYBB
[Raw transfer]




PGA_C_3(2BTM)
TPIS_GEOSE
[Raw transfer]




GOL_A_3(4HHP)
TPIS_TRYCR
[Raw transfer]




1GP_A_2(2Y61)
TPIS_LEIME
[Raw transfer]




BBR_A_2(2Y63)
TPIS_LEIME
[Raw transfer]




G3P_A_2(2Y62)
TPIS_LEIME
[Raw transfer]




GOL_A_7(2VXN)
TPIS_LEIME
[Raw transfer]




3PP_C_3(1IIG)
TPIS_TRYBB
[Raw transfer]




4PB_C_3(1TSI)
TPIS_TRYBB
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




DMS_A_3(1TPF)
TPIS_TRYBB
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




DMS_B_5(1TPF)
TPIS_TRYBB
[Raw transfer]




DMS_B_6(1TPF)
TPIS_TRYBB
[Raw transfer]




1 PsiBlast_PDB 96.8199%-129 - C6 -4HHP 3.2 TPIS_TRYCR
49 PsiBlast_CBE 89.3873%-129 - C6 -2J27 2.8 TPIS_TRYBB
24 PsiBlast_CBE 88.7173%-126 - C6 -1TPF 3.4 TPIS_TRYBB
25 PsiBlast_CBE 88.6073%-127 - C6 -1TPF 3.5 TPIS_TRYBB
48 PsiBlast_CBE 88.3873%-129 - C6 -2J27 3.7 TPIS_TRYBB
39 PsiBlast_CBE 88.2273%-126 - C6 -2V2C 3.6 TPIS_TRYBB
20 PsiBlast_CBE 88.1973%-126 - C6 -4TIM 3.1 TPIS_TRYBB
17 PsiBlast_CBE 88.1673%-127 - C6 -6TIM 3.0 TPIS_TRYBB
26 PsiBlast_CBE 87.7373%-126 - C6 -1IIH 4.1 TPIS_TRYBB
27 PsiBlast_CBE 87.5773%-124 - C6 -1IIG 3.4 TPIS_TRYBB
38 PsiBlast_CBE 87.3373%-124 - C6 -1KV5 3.3 TPIS_TRYBB
23 PsiBlast_CBE 87.1973%-126 - C6 -1TRD 3.3 TPIS_TRYBB
37 PsiBlast_CBE 87.0973%-124 - C6 -1KV5 3.3 TPIS_TRYBB
47 PsiBlast_CBE 86.3073%-126 - C6 -1TSI 2.3 TPIS_TRYBB
11 PsiBlast_PDB 85.7568%-124 - C6 -2Y63 3.1 TPIS_LEIME
7 PsiBlast_PDB 85.6968%-124 - C6 -1N55 3.4 TPIS_LEIME
62 HHSearch 85.3569%-121 - C6 -2VXN 4.3 TPIS_LEIME
5 PsiBlast_PDB 85.0268%-121 - C6 -1QDS 4.1 TPIS_LEIME
10 PsiBlast_PDB 84.8768%-123 - C6 -2Y62 3.7 TPIS_LEIME
9 PsiBlast_PDB 84.7168%-122 - C6 -2Y61 3.8 TPIS_LEIME
50 Fugue 84.4868%-121 - C6 -1IF2 4.3 TPIS_LEIME
75 HHSearch 78.0851%-123 - C6 -4MKN 2.8 ?
61 HHSearch 75.0744%-122 - C6 -1O5X 3.2 TPIS_PLAFA
67 HHSearch 72.3343%-111 - C6 -2BTM 4.0 TPIS_GEOSE