@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00144_AMPC_E: (2014-08-29 )
MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0NA_A_3(4E3K)
AMPC_ECOLI
[Raw transfer]




0NA_B_6(4E3K)
AMPC_ECOLI
[Raw transfer]




0N4_B_5(4E3J)
AMPC_ECOLI
[Raw transfer]




0NB_B_9(4E3L)
AMPC_ECOLI
[Raw transfer]




0ND_B_5(4E3M)
AMPC_ECOLI
[Raw transfer]




0N3_A_3(4E3I)
AMPC_ECOLI
[Raw transfer]




0ND_A_3(4E3M)
AMPC_ECOLI
[Raw transfer]




0N3_B_7(4E3I)
AMPC_ECOLI
[Raw transfer]




SM2_A_4(1MXO)
AMPC_ECOLI
[Raw transfer]




0NB_A_3(4E3L)
AMPC_ECOLI
[Raw transfer]




SM4_A_3(2RCX)
AMPC_ECOLI
[Raw transfer]




0N4_A_3(4E3J)
AMPC_ECOLI
[Raw transfer]




BSG_B_5(3O87)
AMPC_ECOLI
[Raw transfer]




SM4_B_6(2RCX)
AMPC_ECOLI
[Raw transfer]




0NE_B_5(4E3N)
AMPC_ECOLI
[Raw transfer]




0NE_A_3(4E3N)
AMPC_ECOLI
[Raw transfer]




BSF_B_5(3O86)
AMPC_ECOLI
[Raw transfer]




BSG_A_3(3O87)
AMPC_ECOLI
[Raw transfer]




C9P_A_3(3BM6)
AMPC_ECOLI
[Raw transfer]




C9P_B_4(3BM6)
AMPC_ECOLI
[Raw transfer]




SM3_A_4(1MY8)
AMPC_ECOLI
[Raw transfer]




23C_B_14(2R9W)
AMPC_ECOLI
[Raw transfer]




BSH_A_3(3O88)
AMPC_ECOLI
[Raw transfer]




BSF_A_3(3O86)
AMPC_ECOLI
[Raw transfer]




0NG_B_6(4E3O)
AMPC_ECOLI
[Raw transfer]




BSH_B_5(3O88)
AMPC_ECOLI
[Raw transfer]




ETP_A_6(1GA9)
AMPC_ECOLI
[Raw transfer]




0NG_A_3(4E3O)
AMPC_ECOLI
[Raw transfer]




WH6_B_14(2R9X)
AMPC_ECOLI
[Raw transfer]




3GV_A_7(3GVB)
AMPC_ECOLI
[Raw transfer]




MOX_A_3(1FCO)
AMPC_ECOLI
[Raw transfer]




GV9_A_3(3GV9)
AMPC_ECOLI
[Raw transfer]




CB4_A_4(1IEM)
AMPC_ECOLI
[Raw transfer]




CAZ_A_4(1IEL)
AMPC_ECOLI
[Raw transfer]




BZB_A_3(1C3B)
AMPC_ECOLI
[Raw transfer]




STC_A_3(1L2S)
AMPC_ECOLI
[Raw transfer]




GF1_B_16(3GSG)
AMPC_ECOLI
[Raw transfer]




ZX0_A_2(2WZX)
AMPC_PSEAE
[Raw transfer]




IM2_A_3(1LL5)
AMPC_ECOLI
[Raw transfer]




GTC_B_7(3GTC)
AMPC_ECOLI
[Raw transfer]




APB_A_3(3BLS)
AMPC_ECOLI
[Raw transfer]




GV9_B_8(3GV9)
AMPC_ECOLI
[Raw transfer]




APB_B_4(3BLS)
AMPC_ECOLI
[Raw transfer]




G14_B_12(3GRJ)
AMPC_ECOLI
[Raw transfer]




GTC_A_4(3GTC)
AMPC_ECOLI
[Raw transfer]




GF4_A_3(3GR2)
AMPC_ECOLI
[Raw transfer]




BDB_A_4(1KE3)
AMPC_ECOLI
[Raw transfer]




4CB_A_4(1KDW)
AMPC_ECOLI
[Raw transfer]




NPB_A_3(1KDS)
AMPC_ECOLI
[Raw transfer]




CVB_A_4(1KE0)
AMPC_ECOLI
[Raw transfer]




GF7_A_5(3GQZ)
AMPC_ECOLI
[Raw transfer]




35 PsiBlast_CBE 99.53100% -99 - C1 -3O88 4.1 AMPC_ECOLI
25 PsiBlast_CBE 99.48100% -96 - C1 -4E3M 4.9 AMPC_ECOLI
56 PsiBlast_CBE 99.44100% -99 - C1 -2RCX 4.1 AMPC_ECOLI
23 PsiBlast_CBE 99.34100% -97 - C1 -4E3N 5.0 AMPC_ECOLI
31 PsiBlast_CBE 99.21100% -97 - C1 -4E3J 4.3 AMPC_ECOLI
60 PsiBlast_CBE 99.16100% -98 - C1 -2R9W 6.1 AMPC_ECOLI
58 PsiBlast_CBE 99.09100% -96 - C1 -2R9X 5.6 AMPC_ECOLI
21 PsiBlast_CBE 99.06100% -97 - C1 -4E3O 2.5 AMPC_ECOLI
29 PsiBlast_CBE 99.03100% -96 - C1 -4E3K 4.5 AMPC_ECOLI
39 PsiBlast_CBE 98.99100% -98 - C1 -3O86 3.7 AMPC_ECOLI
37 PsiBlast_CBE 98.98100% -96 - C1 -3O87 4.1 AMPC_ECOLI
57 PsiBlast_CBE 98.96100% -96 - C1 -2RCX 4.8 AMPC_ECOLI
45 PsiBlast_CBE 98.92100% -97 - C1 -3GTC 2.7 AMPC_ECOLI
27 PsiBlast_CBE 98.92100% -96 - C1 -4E3L 5.2 AMPC_ECOLI
49 PsiBlast_CBE 98.89100% -97 - C1 -3GRJ 3.5 AMPC_ECOLI
43 PsiBlast_CBE 98.84100% -97 - C1 -3GV9 4.7 AMPC_ECOLI
12 PsiBlast_PDB 98.81100% -97 - C1 -1KE3 3.6 AMPC_ECOLI
53 PsiBlast_CBE 98.79100% -96 - C1 -3BM6 3.7 AMPC_ECOLI
6 PsiBlast_PDB 98.74100% -97 - C1 -1IEM 3.8 AMPC_ECOLI
33 PsiBlast_CBE 98.69100% -97 - C1 -4E3I 5.4 AMPC_ECOLI
19 PsiBlast_PDB 98.49100% -96 - C1 -1MY8 4.2 AMPC_ECOLI
18 PsiBlast_PDB 98.33100% -96 - C1 -1MXO 4.6 AMPC_ECOLI
54 PsiBlast_CBE 98.30100% -96 - C1 -3BM6 5.3 AMPC_ECOLI
47 PsiBlast_CBE 98.27100% -97 - C1 -3GSG 2.9 AMPC_ECOLI
34 PsiBlast_CBE 98.27100% -98 - C1 -4E3I 5.2 AMPC_ECOLI
11 PsiBlast_PDB 98.20100% -96 - C1 -1KE0 3.4 AMPC_ECOLI
5 PsiBlast_PDB 98.19100% -96 - C1 -1IEL 4.1 AMPC_ECOLI
30 PsiBlast_CBE 98.18100% -96 - C1 -4E3K 4.6 AMPC_ECOLI
32 PsiBlast_CBE 98.15100%-101 - C1 -4E3J 4.3 AMPC_ECOLI
44 PsiBlast_CBE 98.13100% -95 - C1 -3GV9 2.9 AMPC_ECOLI
7 PsiBlast_PDB 98.11100% -95 - C1 -1GA9 5.5 AMPC_ECOLI
24 PsiBlast_CBE 98.10100% -96 - C1 -4E3N 5.0 AMPC_ECOLI
14 PsiBlast_PDB 98.08100% -98 - C1 -1L2S 4.6 AMPC_ECOLI
9 PsiBlast_PDB 98.07100% -94 - C1 -1KDS 4.0 AMPC_ECOLI
3 PsiBlast_PDB 98.07100% -96 - C1 -1C3B 4.3 AMPC_ECOLI
10 PsiBlast_PDB 98.01100% -96 - C1 -1KDW 4.0 AMPC_ECOLI
36 PsiBlast_CBE 97.94100% -96 - C1 -3O88 4.7 AMPC_ECOLI
46 PsiBlast_CBE 97.93100% -95 - C1 -3GTC 2.8 AMPC_ECOLI
42 PsiBlast_CBE 97.87100% -95 - C1 -3GVB 4.4 AMPC_ECOLI
40 PsiBlast_CBE 97.83100%-101 - C1 -3O86 3.4 AMPC_ECOLI
26 PsiBlast_CBE 97.82100% -95 - C1 -4E3M 5.0 AMPC_ECOLI
38 PsiBlast_CBE 97.78100%-101 - C1 -3O87 3.9 AMPC_ECOLI
52 PsiBlast_CBE 97.76100% -96 - C1 -3GQZ 3.5 AMPC_ECOLI
22 PsiBlast_CBE 97.72100% -97 - C1 -4E3O 2.7 AMPC_ECOLI
51 PsiBlast_CBE 97.70100% -95 - C1 -3GR2 4.0 AMPC_ECOLI
4 PsiBlast_PDB 97.70100%-100 - C1 -1FCO 3.5 AMPC_ECOLI
55 PsiBlast_CBE 97.69100% -96 - C1 -3BLS 3.5 AMPC_ECOLI
28 PsiBlast_CBE 97.67100% -97 - C1 -4E3L 4.5 AMPC_ECOLI
2 PsiBlast_PDB 97.64100% -95 - C1 -3BLS 3.3 AMPC_ECOLI
17 PsiBlast_PDB 97.46100%-101 - C1 -1LL5 2.8 AMPC_ECOLI
48 PsiBlast_CBE 97.06100% -95 - C1 -3GSG - AMPC_ECOLI
73 HHSearch 79.6843% -85 - C1 -2WZX 3.6 AMPC_PSEAE
74 HHSearch 78.5244% -88 - C1 -1ZKJ - ?