@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00144_BLAC_B: (2014-08-29 )
MKLWFSTLKLKKAAAVLLFSCVALAGCANNQTNASQPAEKNEKTEMKDDFAKLEEQFDAKLGIFALDTGTNRTVAYRPDERFAFASTIKALTVGVLLQQKSIEDLNQRITYTRDDLVNYNPITEKHVDTGMTLKELADASLRYSDNAAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALVTSLRAFALEDKLPSEKRELLIDWMKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALNMNGK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PCZ_B_5(3SH9)
BLAC_BACLI
[Raw transfer]



PCZ_B_4(3M2K)
BLAC_BACLI
[Raw transfer]



PCZ_A_3(3SH9)
BLAC_BACLI
[Raw transfer]



CED_B_4(3SH8)
BLAC_BACLI
[Raw transfer]



PNM_A_2(3LY4)
BLAC_BACLI
[Raw transfer]



PCZ_A_3(3M2K)
BLAC_BACLI
[Raw transfer]



CED_A_3(3SH8)
BLAC_BACLI
[Raw transfer]



CIT_B_6(1I2S)
BLAC_BACLI
[Raw transfer]



L4C_A_3(2X71)
?
[Raw transfer]



CIT_A_5(1I2S)
BLAC_BACLI
[Raw transfer]



A33_B_4(3B3X)
BLAC_BACLI
[Raw transfer]



A33_A_3(3B3X)
BLAC_BACLI
[Raw transfer]



CFX_A_3(1I2W)
BLAC_BACLI
[Raw transfer]



CFX_B_4(1I2W)
BLAC_BACLI
[Raw transfer]



CIT_B_4(3SOI)
BLAC_BACLI
[Raw transfer]



SMX_A_3(3NY4)
BLAC_MYCTU
[Raw transfer]



CIT_A_3(3SOI)
BLAC_BACLI
[Raw transfer]



TBE_B_7(4A5R)
?
[Raw transfer]



F5M_A_4(3M2J)
BLAC_BACLI
[Raw transfer]



98J_B_6(2Y91)
BLAC_BACLI
[Raw transfer]



EPE_A_3(4GNU)
?
[Raw transfer]



TBE_A_3(4A5R)
?
[Raw transfer]



CIT_A_2(3C5A)
?
[Raw transfer]



EPE_A_11(3LEZ)
?
[Raw transfer]



CO2_B_8(4A5R)
?
[Raw transfer]



CO2_B_6(4A5R)
?
[Raw transfer]



MES_A_3(1HZO)
BLAB_PROVU
[Raw transfer]



PNM_A_6(1GHP)
BLAC_STAAU
[Raw transfer]



BB0_A_3(3SH7)
BLAC_BACLI
[Raw transfer]



98J_A_3(2Y91)
BLAC_BACLI
[Raw transfer]



BB0_A_4(3SH9)
BLAC_BACLI
[Raw transfer]



BB0_B_4(3SH7)
BLAC_BACLI
[Raw transfer]



BB0_B_6(3SH9)
BLAC_BACLI
[Raw transfer]
12 PsiBlast_PDB 96.3099% -72 - C2 -3M2J 4.6 BLAC_BACLI
28 PsiBlast_CBE 96.2999% -79 - C2 -3M2K 3.2 BLAC_BACLI
31 PsiBlast_CBE 96.1397% -72 - C2 -4A5R 4.2 ?
24 PsiBlast_CBE 96.1099% -72 - C2 -3SH9 3.8 BLAC_BACLI
11 PsiBlast_PDB 96.0699% -71 - C2 -3LY4 4.9 BLAC_BACLI
25 PsiBlast_CBE 95.9999% -71 - C2 -3SH8 3.5 BLAC_BACLI
7 PsiBlast_PDB 95.9799% -70 - C2 -3SH8 3.9 BLAC_BACLI
35 PsiBlast_CBE 95.7296% -73 - C2 -2Y91 2.5 BLAC_BACLI
8 PsiBlast_PDB 95.6399% -71 - C2 -3SH9 3.0 BLAC_BACLI
26 PsiBlast_CBE 95.4699% -70 - C2 -3SH7 5.1 BLAC_BACLI
6 PsiBlast_PDB 95.3499% -66 - C2 -3SH7 3.0 BLAC_BACLI
27 PsiBlast_CBE 95.2398% -65 - C2 -3SOI 3.1 BLAC_BACLI
18 PsiBlast_PDB 95.1497% -70 - C2 -4A5R 4.4 ?
15 PsiBlast_PDB 95.0697% -74 - C2 -3B3X 2.9 BLAC_BACLI
17 PsiBlast_PDB 95.0197% -70 - C2 -2X71 4.4 ?
10 PsiBlast_PDB 94.9598% -64 - C2 -3SOI 3.7 BLAC_BACLI
33 PsiBlast_CBE 94.9497% -68 - C2 -2X71 - ?
3 PsiBlast_PDB 94.6697% -70 - C2 -1I2W 3.4 BLAC_BACLI
32 PsiBlast_CBE 94.6297% -71 - C2 -3B3X 2.7 BLAC_BACLI
2 PsiBlast_PDB 94.2397% -68 - C2 -1I2S 3.9 BLAC_BACLI
13 PsiBlast_PDB 94.1499% -80 - C2 -3M2K 4.2 BLAC_BACLI
21 PsiBlast_CBE 94.1197% -70 - C2 -1I2W 3.8 BLAC_BACLI
22 PsiBlast_CBE 93.9997% -69 - C2 -1I2S 3.6 BLAC_BACLI
50 HHSearch 83.7957% -63 - C2 -3LEZ 2.2 ?
55 HHSearch 80.9847% -68 - C2 -3NY4 6.0 BLAC_MYCTU
56 HHSearch 77.8443% -57 - C2 -1HZO 3.4 BLAB_PROVU
59 HHSearch 77.6943% -60 - C2 -3C5A 4.2 ?
47 HHSearch 77.4042% -64 - C2 -1GHP 3.1 BLAC_STAAU
53 HHSearch 71.5433% -44 - C2 -4GNU 2.2 ?
19 PsiBlast_PDB 70.7096% 14 - C2 -2Y91 2.8 BLAC_BACLI