@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00144_BLAT_E: (2014-08-29 )
MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3P98)
?
[Raw transfer]



CIT_B_5(3P98)
?
[Raw transfer]



BJP_A_2(1ERO)
BLAT_ECOLX
[Raw transfer]



SM2_A_3(1NXY)
BLAT_ECOLX
[Raw transfer]



BJH_A_2(1ERQ)
BLAT_ECOLX
[Raw transfer]



PNM_A_2(1FQG)
BLAT_ECOLX
[Raw transfer]



CXB_A_7(1NYM)
BLAT_ECOLX
[Raw transfer]



NBF_A_4(1NY0)
BLAT_ECOLX
[Raw transfer]



105_A_2(1NYY)
BLAT_ECOLX
[Raw transfer]



CB4_A_7(1JWV)
BLAT_ECOLX
[Raw transfer]



105_A_2(1JWZ)
BLAT_ECOLX
[Raw transfer]



ALP_A_2(1TEM)
BLAT_ECOLX
[Raw transfer]



EPE_A_4(1N9B)
BLA3_KLEPN
[Raw transfer]



MES_A_3(4IBR)
BLAT_ECOLX
[Raw transfer]



IM2_A_10(1BT5)
BLAT_ECOLX
[Raw transfer]



FOS_B_2(1AXB)
BLAT_ECOLX
[Raw transfer]



IM2_A_7(1JVJ)
BLAT_ECOLX
[Raw transfer]



EPE_A_11(3LEZ)
?
[Raw transfer]



BIY_A_3(2WK0)
BLAC_BACLI
[Raw transfer]



CBT_A_2(1PZO)
BLAT_ECOLX
[Raw transfer]



FTA_B_2(1PZP)
BLAT_ECOLX
[Raw transfer]



MA4_A_2(1N9B)
BLA3_KLEPN
[Raw transfer]



CBT_A_3(1PZO)
BLAT_ECOLX
[Raw transfer]
25 PsiBlast_CBE 94.7799% -94 - C1 -1NY0 4.1 BLAT_ECOLX
19 PsiBlast_PDB 94.7499% -96 - C1 -1TEM 3.1 BLAT_ECOLX
3 PsiBlast_PDB 94.44100% -92 - C1 -1ERO 4.0 BLAT_ECOLX
4 PsiBlast_PDB 94.32100% -94 - C1 -1ERQ 4.7 BLAT_ECOLX
17 PsiBlast_PDB 93.6999% -94 - C1 -1AXB 3.0 BLAT_ECOLX
23 PsiBlast_CBE 93.5699% -93 - C1 -1NYY 4.6 BLAT_ECOLX
24 PsiBlast_CBE 93.5599% -90 - C1 -1NYM 2.9 BLAT_ECOLX
2 PsiBlast_PDB 93.3698% -93 - C1 -3P98 2.6 ?
15 PsiBlast_PDB 92.9999% -92 - C1 -1BT5 2.9 BLAT_ECOLX
13 PsiBlast_PDB 92.9799% -95 - C1 -1FQG 3.6 BLAT_ECOLX
27 PsiBlast_CBE 92.8499% -91 - C1 -1PZP 5.1 BLAT_ECOLX
35 PsiBlast_CBE 92.5499% -91 - C1 -1JVJ 3.4 BLAT_ECOLX
10 PsiBlast_PDB 92.4999% -92 - C1 -1JWV 3.5 BLAT_ECOLX
26 PsiBlast_CBE 92.0199% -91 - C1 -1NXY 3.5 BLAT_ECOLX
22 PsiBlast_CBE 91.8599% -88 - C1 -1PZO 5.9 BLAT_ECOLX
21 PsiBlast_CBE 91.4798% -91 - C1 -3P98 4.1 ?
37 PsiBlast_CBE 90.9898% -91 - C1 -1JWZ 3.5 BLAT_ECOLX
43 PsiBlast_CBE 88.6196% -89 - C1 -4IBR 1.8 BLAT_ECOLX
53 HHSearch 80.8969% -86 - C1 -1N9B 5.7 BLA3_KLEPN
63 HHSearch 62.3738% -83 - C1 -3LEZ 2.2 ?
61 HHSearch 61.9937% -81 - C1 -2WK0 3.6 BLAC_BACLI