@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00144_BLC1_E: (2014-08-29 )
MVKKSLRQFTLMATATVTLLLGSVPLYAQTADVQQKLAELERQSGGRLGVALINTADNSQILYRADERFAMCSTSKVMAVAAVLKKSESEPNLLNQRVEIKKSDLVNYNPIAEKHVDGTMSLAELSAAALQYSDNVAMNKLISHVGGPASVTAFARQLGDETFRLDRTEPTLNTAIPGDPRDTTSPRAMAQTLRNLTLGKALGDSQRAQLVTWMKGNTTGAASIQAGLPASWVVGDKTGSGDYGTTNDIAVIWPKDRAPLILVTYFTQPQPKAESRRDVLASAAKIVTNGL

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CE3_A_3(3HLW)
?
[Raw transfer]




PCZ_A_2(2ZQA)
BLT1_ECOLX
[Raw transfer]




WPP_B_5(3Q07)
?
[Raw transfer]




CAZ_A_6(2ZQD)
BLT1_ECOLX
[Raw transfer]




0J6_B_5(4DE1)
?
[Raw transfer]




CB4_A_6(1YLZ)
?
[Raw transfer]




CE3_B_5(3HLW)
?
[Raw transfer]




NXL_A_2(4HBU)
?
[Raw transfer]




CB4_B_6(1YLY)
?
[Raw transfer]




PNN_A_3(3HUO)
?
[Raw transfer]




CB4_A_5(1YLY)
?
[Raw transfer]




F13_A_3(3G35)
?
[Raw transfer]




CB4_B_7(1YLZ)
?
[Raw transfer]




PNK_A_3(3HVF)
?
[Raw transfer]




SMX_A_3(3NY4)
BLAC_MYCTU
[Raw transfer]




PNK_B_4(3HVF)
?
[Raw transfer]




AZR_A_6(2ZQC)
BLT1_ECOLX
[Raw transfer]




PNN_B_7(3HUO)
?
[Raw transfer]




WPP_A_3(3Q07)
?
[Raw transfer]




F13_B_5(3G35)
?
[Raw transfer]




0JB_B_4(4DE0)
?
[Raw transfer]




DN3_B_6(4DE2)
?
[Raw transfer]




G30_A_2(3G30)
?
[Raw transfer]




DN3_A_3(4DE2)
?
[Raw transfer]




CFX_A_3(1YMX)
?
[Raw transfer]




NBF_A_3(1YMS)
?
[Raw transfer]




DN8_A_3(4DE3)
?
[Raw transfer]




CEP_A_5(1IYP)
BLT1_ECOLX
[Raw transfer]




SM2_A_7(1YM1)
?
[Raw transfer]




GF1_A_5(3G31)
?
[Raw transfer]




PNM_A_5(1IYQ)
BLT1_ECOLX
[Raw transfer]




DN8_B_10(4DE3)
?
[Raw transfer]




SM2_B_8(1YM1)
?
[Raw transfer]




CFX_B_4(1YMX)
?
[Raw transfer]




CEF_A_5(1IYO)
BLT1_ECOLX
[Raw transfer]




GF1_B_9(3G31)
?
[Raw transfer]




NBF_B_4(1YMS)
?
[Raw transfer]




YPP_A_3(3Q1F)
?
[Raw transfer]




YPP_B_5(3Q1F)
?
[Raw transfer]




CEO_A_4(2ZQ9)
BLT1_ECOLX
[Raw transfer]




ICT_A_3(1W7F)
BLAC_BACLI
[Raw transfer]




1CE_B_6(3G34)
?
[Raw transfer]




1CE_A_3(3G34)
?
[Raw transfer]




GZ2_A_3(3G2Z)
?
[Raw transfer]




GZ2_B_7(3G2Z)
?
[Raw transfer]




MES_A_3(1HZO)
BLAB_PROVU
[Raw transfer]




CIT_A_2(3C5A)
?
[Raw transfer]




EPE_A_11(3LEZ)
?
[Raw transfer]




0JB_A_3(4DE0)
?
[Raw transfer]




EPE_A_3(4GNU)
?
[Raw transfer]




BIY_A_3(2WK0)
BLAC_BACLI
[Raw transfer]




0J6_A_3(4DE1)
?
[Raw transfer]




CE3_B_6(3HLW)
?
[Raw transfer]




0J6_B_7(4DE1)
?
[Raw transfer]




DMS_A_5(3G32)
?
[Raw transfer]




DN8_A_8(4DE3)
?
[Raw transfer]




DMS_B_10(3G2Z)
?
[Raw transfer]




2 PsiBlast_PDB 98.7898% -77 - C2 -4HBU 2.7 ?
29 PsiBlast_CBE 92.4281% -74 - C2 -3G31 3.3 ?
31 PsiBlast_CBE 92.4081% -74 - C2 -3G2Z 4.0 ?
21 PsiBlast_CBE 92.3382% -74 - C2 -1YLZ 4.0 ?
20 PsiBlast_PDB 92.3082% -73 - C2 -1YLZ 3.8 ?
28 PsiBlast_CBE 92.2481% -76 - C2 -3G31 3.2 ?
35 PsiBlast_CBE 92.1681% -74 - C2 -1YMS 5.0 ?
38 PsiBlast_CBE 92.0781% -74 - C2 -1YM1 4.3 ?
49 PsiBlast_CBE 91.8481% -73 - C2 -3HUO 4.8 ?
39 PsiBlast_CBE 91.8481% -76 - C2 -1YLY 4.3 ?
59 PsiBlast_CBE 91.8281% -75 - C2 -4DE1 6.4 ?
57 PsiBlast_CBE 91.8281% -74 - C2 -4DE2 6.5 ?
24 PsiBlast_CBE 91.8281% -73 - C2 -3G34 3.5 ?
54 PsiBlast_CBE 91.8181% -71 - C2 -3HLW 4.1 ?
33 PsiBlast_CBE 91.7781% -73 - C2 -1YMX 3.7 ?
30 PsiBlast_CBE 91.6781% -75 - C2 -3G30 3.3 ?
32 PsiBlast_CBE 91.6681% -74 - C2 -3G2Z 3.8 ?
56 PsiBlast_CBE 91.6181% -73 - C2 -4DE3 6.3 ?
27 PsiBlast_CBE 91.5881% -73 - C2 -3G32 3.5 ?
53 PsiBlast_CBE 91.5781% -73 - C2 -3HLW 4.4 ?
58 PsiBlast_CBE 91.5081% -72 - C2 -4DE2 6.3 ?
47 PsiBlast_CBE 91.4981% -73 - C2 -3HVF 4.7 ?
22 PsiBlast_CBE 91.4681% -73 - C2 -3G35 6.3 ?
8 PsiBlast_PDB 91.4684% -73 - C2 -1IYP 4.8 BLT1_ECOLX
15 PsiBlast_PDB 91.4283% -76 - C2 -2ZQA 4.6 BLT1_ECOLX
40 PsiBlast_CBE 91.4081% -74 - C2 -1YLY 3.9 ?
17 PsiBlast_PDB 91.3583% -76 - C2 -2ZQD 4.1 BLT1_ECOLX
44 PsiBlast_CBE 91.3381% -72 - C2 -3Q1F 5.5 ?
37 PsiBlast_CBE 91.3181% -73 - C2 -1YM1 4.7 ?
61 PsiBlast_CBE 91.2581% -75 - C2 -4DE0 6.3 ?
36 PsiBlast_CBE 91.2281% -71 - C2 -1YMS 4.4 ?
34 PsiBlast_CBE 91.1581% -73 - C2 -1YMX 4.0 ?
55 PsiBlast_CBE 91.1081% -75 - C2 -4DE3 6.5 ?
50 PsiBlast_CBE 91.0781% -72 - C2 -3HUO 4.8 ?
25 PsiBlast_CBE 90.9281% -72 - C2 -3G34 4.5 ?
7 PsiBlast_PDB 90.7984% -74 - C2 -1IYO 4.4 BLT1_ECOLX
23 PsiBlast_CBE 90.7781% -73 - C2 -3G35 6.1 ?
45 PsiBlast_CBE 90.7681% -74 - C2 -3Q07 5.7 ?
48 PsiBlast_CBE 90.6481% -72 - C2 -3HVF 4.2 ?
43 PsiBlast_CBE 90.5881% -73 - C2 -3Q1F 5.6 ?
46 PsiBlast_CBE 90.4081% -70 - C2 -3Q07 7.3 ?
16 PsiBlast_PDB 90.3383% -76 - C2 -2ZQC 6.2 BLT1_ECOLX
9 PsiBlast_PDB 90.2584% -74 - C2 -1IYQ 4.2 BLT1_ECOLX
14 PsiBlast_PDB 89.4683% -75 - C2 -2ZQ9 3.4 BLT1_ECOLX
83 HHSearch 86.4768% -69 * C2 *1HZO 3.3 BLAB_PROVU
81 HHSearch 82.0949% -70 - C2 -3C5A 3.0 ?
85 HHSearch 76.5643% -66 - C2 -3LEZ 3.0 ?
78 HHSearch 76.0845% -70 - C2 -3NY4 5.6 BLAC_MYCTU
84 HHSearch 74.5743% -67 - C2 -2WK0 3.9 BLAC_BACLI
77 HHSearch 74.5343% -63 - C2 -1W7F 2.9 BLAC_BACLI
73 HHSearch 66.0834% -55 - C2 -4GNU 2.2 ?
62 PsiBlast_CBE 45.1481% 27 - C2 -4DE0 4.5 ?
60 PsiBlast_CBE 45.0081% 27 - C2 -4DE1 4.1 ?