@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00149_PP2AA_: (2014-08-29 )
MDEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRGEPHVTRRTPDYFL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

XT1_C_4(3K7V)
PP2AA_HUMAN
[Raw transfer]



AGS_C_7(4LAC)
PP2AA_HUMAN
[Raw transfer]



OKA_C_5(2IE4)
PP2AA_HUMAN
[Raw transfer]



XT2_C_4(3K7W)
PP2AA_HUMAN
[Raw transfer]



CHAIN_H_8(3DW8)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_H_8(4I5N)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_H_8(4I5L)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_H_8(2NYL)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_H_8(2NYM)
PP2AA_HUMAN
[Raw transfer]
-
CIT_A_11(4J6O)
?
[Raw transfer]



CHAIN_C_3(3E7A)
PP1A_HUMAN
[Raw transfer]
-
CHAIN_G_7(2NYL)
PP2AA_HUMAN
[Raw transfer]
-
NHC_A_5(3H63)
PPP5_HUMAN
[Raw transfer]



CHAIN_G_7(2NYM)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_I_3(2IE3)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_G_7(4I5N)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_M_3(1FJM)
PP1A_RABIT
[Raw transfer]
-
CHAIN_G_7(4I5L)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_M_7(2IAE)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_Y_8(2NPP)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_X_7(2NPP)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_G_7(3DW8)
PP2AA_HUMAN
[Raw transfer]
-
CHAIN_N_8(2IAE)
PP2AA_HUMAN
[Raw transfer]
-
10 PsiBlast_CBE 98.40100%-116 - C3 -2NPP 8.3 PP2AA_HUMAN
9 PsiBlast_CBE 97.95100%-116 - C3 -2NPP 6.6 PP2AA_HUMAN
20 PsiBlast_CBE 96.59100%-119 - C3 -2NYM 7.4 PP2AA_HUMAN
1 PsiBlast_PDB 96.05100%-117 - C3 -4I5L 8.4 PP2AA_HUMAN
13 PsiBlast_CBE 95.62100%-114 - C3 -4I5L 7.4 PP2AA_HUMAN
12 PsiBlast_CBE 95.51100%-116 - C3 -4I5N 7.7 PP2AA_HUMAN
22 PsiBlast_CBE 95.36100%-118 - C3 -2NYL 7.0 PP2AA_HUMAN
2 PsiBlast_PDB 95.17100%-118 - C3 -4I5N 6.7 PP2AA_HUMAN
19 PsiBlast_CBE 95.05100%-118 - C3 -2NYM 6.9 PP2AA_HUMAN
3 PsiBlast_PDB 94.51100%-118 - C3 -4LAC 4.2 PP2AA_HUMAN
11 PsiBlast_CBE 94.50100%-118 - C3 -2IE4 9.9 PP2AA_HUMAN
17 PsiBlast_CBE 94.4699%-116 - C3 -2IAE 2.9 PP2AA_HUMAN
6 PsiBlast_CBE 94.08100%-117 - C3 -3K7V 10.3 PP2AA_HUMAN
5 PsiBlast_CBE 93.90100%-119 - C3 -3K7W 9.7 PP2AA_HUMAN
14 PsiBlast_CBE 93.6599%-118 - C3 -2IE3 7.3 PP2AA_HUMAN
21 PsiBlast_CBE 93.36100%-113 - C3 -2NYL 6.1 PP2AA_HUMAN
7 PsiBlast_CBE 92.75100%-117 - C3 -3DW8 6.4 PP2AA_HUMAN
8 PsiBlast_CBE 92.04100%-116 - C3 -3DW8 6.5 PP2AA_HUMAN
16 PsiBlast_CBE 91.3199%-117 - C3 -2IAE 2.7 PP2AA_HUMAN
38 HHSearch 79.8649%-108 - C3 -3E7A 9.0 PP1A_HUMAN
24 Fugue 79.4849%-113 - C3 -1FJM 6.4 PP1A_RABIT
41 HHSearch 72.7239%-100 - C3 -3H63 3.5 PPP5_HUMAN