@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00194_CAH5A_: (2014-08-31 )
MLGRNTWKTSAFSFLVEQMWAPLWSRSMRPGRWCSQRSCAWQTSNNTLHPLWTVPVSVPGGTRQSPINIQWRDSVYDPQLKPLRVSYEAASCLYIWNTGYLFQVEFDDATEASGISGGPLENHYRLKQFHFHWGAVNEGGSEHTVDGHAYPAELHLVHWNSVKYQNYKEAVVGENGLAVIGVFLKLGAHHQTLQRLVDILPEIKHKDARAAMRPFDPSTLLPTCWDYWTYAGSLTTPPLTESVTWIIQKEPVEVAPSQLSAFRTLLFSALGEEEKMMVNNYRPLQPLMNRKVWASFQATNEGTRS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D8W_A_3(3DBU)
CAH2_HUMAN
[Raw transfer]




MZM_A_3(3DCS)
CAH2_HUMAN
[Raw transfer]




B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




AZM_A_3(3DC3)
CAH2_HUMAN
[Raw transfer]




AZM_A_5(1DMY)
CAH5A_MOUSE
[Raw transfer]




AZM_A_3(3ML5)
CAH7_HUMAN
[Raw transfer]




EZL_A_3(3DCW)
CAH2_HUMAN
[Raw transfer]




VZ5_A_3(3OIL)
CAH2_HUMAN
[Raw transfer]




D9Z_A_3(3DCC)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(4LU3)
CAH14_HUMAN
[Raw transfer]




VZ4_A_3(3OKV)
CAH2_HUMAN
[Raw transfer]




AZM_B_6(1DMY)
CAH5A_MOUSE
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




E1F_B_4(4KNN)
CAH13_HUMAN
[Raw transfer]




WZB_A_3(3OIK)
CAH2_HUMAN
[Raw transfer]




AZM_A_6(3IAI)
CAH9_HUMAN
[Raw transfer]




AZM_A_5(1JD0)
CAH12_HUMAN
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




GOL_X_3(3TVO)
CAH2_HUMAN
[Raw transfer]




GOL_A_4(3OIK)
CAH2_HUMAN
[Raw transfer]




TU0_A_3(4BCW)
CAH2_HUMAN
[Raw transfer]




GOL_A_7(3K34)
CAH2_HUMAN
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




ACY_A_8(1Y7W)
?
[Raw transfer]




ACY_B_12(1KEQ)
CAH5A_MOUSE
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




VZ4_A_4(3OKV)
CAH2_HUMAN
[Raw transfer]




EDO_A_8(4HT2)
CAH12_HUMAN
[Raw transfer]




PEG_A_7(4HT2)
CAH12_HUMAN
[Raw transfer]




21 PsiBlast_CBE 97.1377%-105 - C2 -1DMY 3.1 CAH5A_MOUSE
2 PsiBlast_PDB 97.1277%-103 - C2 -1DMY 2.8 CAH5A_MOUSE
38 HHSearch 97.0077%-104 - C2 -1KEQ 4.1 CAH5A_MOUSE
23 PsiBlast_CBE 96.4977%-102 - C2 -1KEQ 2.7 CAH5A_MOUSE
11 PsiBlast_PDB 90.4653%-102 - C2 -3DC3 2.9 CAH2_HUMAN
14 PsiBlast_PDB 90.4153%-100 - C2 -3DCS 3.0 CAH2_HUMAN
16 PsiBlast_PDB 90.3553% -98 - C2 -3OIK 5.5 CAH2_HUMAN
18 PsiBlast_PDB 90.3353%-100 - C2 -3OKV 5.1 CAH2_HUMAN
36 HHSearch 90.1051% -94 * C2 *3K34 3.9 CAH2_HUMAN
13 PsiBlast_PDB 89.9653%-100 - C2 -3DCC 4.1 CAH2_HUMAN
17 PsiBlast_PDB 89.7953% -98 - C2 -3OIL 5.2 CAH2_HUMAN
15 PsiBlast_PDB 89.7153% -98 - C2 -3DCW 3.9 CAH2_HUMAN
19 PsiBlast_PDB 89.6253%-100 - C2 -4BCW 3.0 CAH2_HUMAN
5 PsiBlast_PDB 89.3953%-100 - C2 -3TVO 3.1 CAH2_HUMAN
10 PsiBlast_PDB 88.9853%-100 - C2 -3DBU 4.2 CAH2_HUMAN
37 HHSearch 88.5449% -91 - C2 -3ML5 3.5 CAH7_HUMAN
33 HHSearch 88.4647% -85 - C2 -4KNN 3.7 CAH13_HUMAN
34 HHSearch 87.8249% -86 - C2 -2FOY 4.4 CAH1_HUMAN
41 HHSearch 79.9633% -94 - C2 -4HT2 3.1 CAH12_HUMAN
42 HHSearch 79.4335% -91 - C2 -4LU3 1.8 CAH14_HUMAN
25 Fugue 78.1532% -95 - C2 -1JD0 3.2 CAH12_HUMAN
39 HHSearch 76.9932% -82 - C2 -3FW3 3.8 CAH4_HUMAN
45 HHSearch 75.4033%-100 - C2 -3IAI 2.8 CAH9_HUMAN
49 HHSearch 71.7931%-107 - C2 -4G7A 3.0 ?
51 HHSearch 70.2530% -81 - C2 -1Y7W 2.5 ?