@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00194_CAH9_H: (2014-08-31 )
MAPLCPSPWLPLLIPAPAPGLTVQLLLSLLLLVPVHPQRLPRMQEDSPLGGGSSGEDDPLGEEDLPSEEDSPREEDPPGEEDLPGEEDLPGEEDLPEVKPKSEEEGSLKLEDLPTVEAPGDPQEPQNNAHRDKEGDDQSHWRYGGDPPWPRVSPACAGRFQSPVDIRPQLAAFCPALRPLELLGFQLPPLPELRLRNNGHSVQLTLPPGLEMALGPGREYRALQLHLHWGAAGRPGSEHTVEGHRFPAEIHVVHLSTAFARVDEALGRPGGLAVLAAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDISALLPSDFSRYFQYEGSLTTPPCAQGVIWTVFNQTVMLSAKQLHTLSDTLWGPGDSRLQLNFRATQPLNGRVIEASFPAGVDSSPRAAEPVQLNSCLAAGDILALVFGLLFAVTSVAFLVQMRRQHRRGTKGGVSYRPAEVAETGA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AZM_B_19(3IAI)
CAH9_HUMAN
[Raw transfer]




D8W_A_3(3DBU)
CAH2_HUMAN
[Raw transfer]




AZM_A_6(3IAI)
CAH9_HUMAN
[Raw transfer]




AZM_A_6(3IAI)
CAH9_HUMAN
[Raw transfer]




B30_A_5(2FOY)
CAH1_HUMAN
[Raw transfer]




AZM_A_3(4LU3)
CAH14_HUMAN
[Raw transfer]




D9Z_A_3(3DCC)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(3ML5)
CAH7_HUMAN
[Raw transfer]




E1G_A_6(4KP8)
CAH12_HUMAN
[Raw transfer]




EZL_A_3(3DCW)
CAH2_HUMAN
[Raw transfer]




AZM_A_3(3DC3)
CAH2_HUMAN
[Raw transfer]




MZM_A_3(3DCS)
CAH2_HUMAN
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




EZL_A_3(3MDZ)
CAH7_HUMAN
[Raw transfer]




AZM_A_5(1JD0)
CAH12_HUMAN
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




E1F_B_4(4KNN)
CAH13_HUMAN
[Raw transfer]




WZB_A_3(3OIK)
CAH2_HUMAN
[Raw transfer]




AZM_A_7(1RJ6)
CAH14_MOUSE
[Raw transfer]




E1F_A_6(4KP5)
CAH12_HUMAN
[Raw transfer]




GOL_A_7(3K34)
CAH2_HUMAN
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




ACY_A_5(1JCZ)
CAH12_HUMAN
[Raw transfer]




ACY_A_8(1RJ5)
CAH14_MOUSE
[Raw transfer]




EDO_A_7(4KP5)
CAH12_HUMAN
[Raw transfer]




EDO_A_8(4HT2)
CAH12_HUMAN
[Raw transfer]




PEG_A_7(4HT2)
CAH12_HUMAN
[Raw transfer]




PEG_A_7(4HT2)
CAH12_HUMAN
[Raw transfer]




4MZ_A_6(1KEQ)
CAH5A_MOUSE
[Raw transfer]




BME_A_9(1KOP)
CAH_NEIGO
[Raw transfer]




34 HHSearch 99.7899%-115 - C2 -3IAI 3.2 CAH9_HUMAN
23 PsiBlast_CBE 97.2299%-116 - C2 -3IAI 3.3 CAH9_HUMAN
3 PsiBlast_PDB 81.4743%-101 - C2 -4LU3 2.9 CAH14_HUMAN
5 PsiBlast_PDB 79.0543% -98 - C2 -1RJ6 2.8 CAH14_MOUSE
4 PsiBlast_PDB 78.7843% -98 - C2 -1RJ5 3.7 CAH14_MOUSE
35 HHSearch 78.5340%-101 - C2 -4HT2 2.5 CAH12_HUMAN
8 PsiBlast_PDB 78.2739%-107 - C2 -4KP8 4.2 CAH12_HUMAN
12 PsiBlast_PDB 77.6036% -95 - C2 -3MDZ 3.5 CAH7_HUMAN
9 PsiBlast_PDB 77.3339%-101 - C2 -1JCZ 2.6 CAH12_HUMAN
11 PsiBlast_PDB 77.3036% -89 - C2 -3ML5 3.3 CAH7_HUMAN
10 PsiBlast_PDB 77.2639%-104 - C2 -1JD0 3.0 CAH12_HUMAN
7 PsiBlast_PDB 77.1139%-105 - C2 -4KP5 5.1 CAH12_HUMAN
39 HHSearch 75.3035% -93 * C2 *3K34 4.5 CAH2_HUMAN
19 PsiBlast_PDB 74.5134% -91 - C2 -3DCW 3.7 CAH2_HUMAN
18 PsiBlast_PDB 74.2934% -95 - C2 -3DCS 2.9 CAH2_HUMAN
15 PsiBlast_PDB 74.1334% -94 - C2 -3DC3 2.9 CAH2_HUMAN
17 PsiBlast_PDB 73.9534% -91 - C2 -3DCC 4.5 CAH2_HUMAN
20 PsiBlast_PDB 73.8234% -91 - C2 -3OIK 5.0 CAH2_HUMAN
14 PsiBlast_PDB 73.3934% -90 - C2 -3DBU 4.1 CAH2_HUMAN
42 HHSearch 73.3136% -92 - C2 -4KNN 3.7 CAH13_HUMAN
45 HHSearch 72.3833% -91 - C2 -2FOY 4.1 CAH1_HUMAN
41 HHSearch 70.4332% -87 - C2 -3FW3 3.8 CAH4_HUMAN
48 HHSearch 69.6234% -83 - C2 -1KEQ 2.7 CAH5A_MOUSE
50 HHSearch 63.7332%-102 - C2 -4G7A 3.0 ?
51 HHSearch 60.5333% -97 - C2 -1KOP 2.6 CAH_NEIGO