@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00273_ALBU_M: (2014-09-03 )
MKWVTFLLLLFVSGSAFSRGVFRREAHKSEIAHRYNDLGEQHFKGLVLIAFSQYLQKCSYDEHAKLVQEVTDFAKTCVADESAANCDKSLHTLFGDKLCAIPNLRENYGELADCCTKQEPERNECFLQHKDDNPSLPPFERPEAEAMCTSFKENPTTFMGHYLHEVARRHPYFYAPELLYYAEQYNEILTQCCAEADKESCLTPKLDGVKEKALVSSVRQRMKCSSMQKFGERAFKAWAVARLSQTFPNADFAEITKLATDLTKVNKECCHGDLLECADDRAELAKYMCENQATISSKLQTCCDKPLLKKAHCLSEVEHDTMPADLPAIAADFVEDQEVCKNYAEAKDVFLGTFLYEYSRRHPDYSVSLLLRLAKKYEATLEKCCAEANPPACYGTVLAEFQPLVEEPKNLVKTNCDLYEKLGEYGFQNAILVRYTQKAPQVSTPTLVEAARNLGRVGTKCCTLPEDQRLPCVEDYLSAILNRVCLLHEKTPVSEHVTKCCSGSLVERRPCFSALTVDETYVPKEFKAETFTFHSDICTLPEKEKQIKKQTALAELVKHKPKATAEQLKTVMDDFAQFLDTCCKAADKDTCFSTEGPNLVTRCKDALA

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

9DS_B_4(2XVQ)
ALBU_HUMAN
[Raw transfer]




DKA_A_5(1E7E)
ALBU_HUMAN
[Raw transfer]




PLM_A_5(4BKE)
?
[Raw transfer]




DAO_A_5(1E7F)
ALBU_HUMAN
[Raw transfer]




ACD_A_5(1GNJ)
ALBU_HUMAN
[Raw transfer]




MYR_A_5(1E7C)
ALBU_HUMAN
[Raw transfer]




9NF_A_3(2XW0)
ALBU_HUMAN
[Raw transfer]




9DS_A_3(2XVQ)
ALBU_HUMAN
[Raw transfer]




9NF_B_5(2XW0)
ALBU_HUMAN
[Raw transfer]




PLM_A_5(1E7H)
ALBU_HUMAN
[Raw transfer]




MYR_A_4(1N5U)
ALBU_HUMAN
[Raw transfer]




OLA_A_5(1GNI)
ALBU_HUMAN
[Raw transfer]




STE_A_5(1E7I)
ALBU_HUMAN
[Raw transfer]




9NV_B_4(2XW1)
ALBU_HUMAN
[Raw transfer]




IO3_B_8(2YDF)
ALBU_HUMAN
[Raw transfer]




STE_A_4(1E7I)
ALBU_HUMAN
[Raw transfer]




P8S_A_2(4E99)
ALBU_HUMAN
[Raw transfer]




OLA_A_4(1GNI)
ALBU_HUMAN
[Raw transfer]




9NV_A_3(2XW1)
ALBU_HUMAN
[Raw transfer]




DAO_A_4(1E7F)
ALBU_HUMAN
[Raw transfer]




T44_A_3(1HK1)
ALBU_HUMAN
[Raw transfer]




DKA_A_4(1E7E)
ALBU_HUMAN
[Raw transfer]




IO3_A_6(2YDF)
ALBU_HUMAN
[Raw transfer]




PFL_A_3(1E7A)
ALBU_HUMAN
[Raw transfer]




IO3_B_10(2YDF)
ALBU_HUMAN
[Raw transfer]




ACD_A_9(1GNJ)
ALBU_HUMAN
[Raw transfer]




18 PsiBlast_PDB 99.1772% -97 - C4 -1HK4 - ALBU_HUMAN
50 PsiBlast_CBE 98.6672% -96 - C4 -3B9M - ALBU_HUMAN
12 PsiBlast_PDB 98.6472% -97 - C4 -1H9Z - ALBU_HUMAN
7 PsiBlast_PDB 98.6372% -96 - C4 -1E7H 5.4 ALBU_HUMAN
21 PsiBlast_CBE 98.5972% -96 - C4 -4BKE 5.8 ?
6 PsiBlast_PDB 98.5972% -98 - C4 -1E7I 6.6 ALBU_HUMAN
14 PsiBlast_PDB 98.5172% -94 - C4 -1GNI 7.3 ALBU_HUMAN
10 PsiBlast_PDB 98.4772% -96 - C4 -1E7C 4.4 ALBU_HUMAN
59 PsiBlast_CBE 98.3072% -96 - C4 -2XW0 6.9 ALBU_HUMAN
22 PsiBlast_CBE 98.2672% -96 - C4 -4LB9 - ALBU_HUMAN
5 PsiBlast_PDB 98.1572% -97 - C4 -1E7G - ALBU_HUMAN
52 PsiBlast_CBE 98.0172% -99 - C4 -3A73 - ALBU_HUMAN
13 PsiBlast_PDB 97.9972% -98 - C4 -1HA2 - ALBU_HUMAN
51 PsiBlast_CBE 97.9772% -94 - C4 -3B9L - ALBU_HUMAN
3 PsiBlast_PDB 97.9772% -94 - C4 -1E7E 4.2 ALBU_HUMAN
15 PsiBlast_PDB 97.8872% -97 - C4 -1GNJ 5.8 ALBU_HUMAN
38 PsiBlast_CBE 97.8772% -98 - C4 -3UIV - ALBU_HUMAN
4 PsiBlast_PDB 97.8572% -99 - C4 -1E7F 5.5 ALBU_HUMAN
74 HHSearch 97.8372% -94 - C4 -1N5U - ALBU_HUMAN
53 PsiBlast_CBE 97.7072% -96 - C4 -3A73 - ALBU_HUMAN
57 PsiBlast_CBE 97.6972% -96 - C4 -2XW1 5.5 ALBU_HUMAN
39 PsiBlast_CBE 97.6472% -96 - C4 -3UIV - ALBU_HUMAN
54 PsiBlast_CBE 97.5872% -95 - C4 -2YDF 5.9 ALBU_HUMAN
31 PsiBlast_CBE 97.5072% -96 - C4 -4L8U - ALBU_HUMAN
9 PsiBlast_PDB 97.5072% -93 - C4 -1E7B - ALBU_HUMAN
62 PsiBlast_CBE 97.3872% -92 - C4 -2XVQ 6.0 ALBU_HUMAN
56 PsiBlast_CBE 97.0172% -93 - C4 -2XW1 5.8 ALBU_HUMAN
63 PsiBlast_CBE 96.9872% -95 - C4 -2XVQ 5.3 ALBU_HUMAN
40 PsiBlast_CBE 96.8872% -90 - C4 -3TDL - ALBU_HUMAN
58 PsiBlast_CBE 96.7872% -93 - C4 -2XW0 6.9 ALBU_HUMAN
55 PsiBlast_CBE 96.7872% -93 - C4 -2YDF 3.6 ALBU_HUMAN
8 PsiBlast_PDB 96.6872% -94 - C4 -1E7A 4.7 ALBU_HUMAN
16 PsiBlast_PDB 96.3372% -96 - C4 -1O9X - ALBU_HUMAN
61 PsiBlast_CBE 95.3872% -95 - C4 -2XVU - ALBU_HUMAN
60 PsiBlast_CBE 94.7672% -90 - C4 -2XVU - ALBU_HUMAN
17 PsiBlast_PDB 94.7572% -92 - C4 -1HK1 5.8 ALBU_HUMAN
37 PsiBlast_CBE 94.3072% -86 - C4 -4E99 2.9 ALBU_HUMAN
66 Fugue 47.5176% -89 - C4 -1BJ5 - ?