@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00275_AROA_E: (2014-09-03 )
MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA

Atome Classification :

(19 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SKP_A_2(1Q36)
AROA_ECOLI
[Raw transfer]




SC1_A_2(1X8R)
AROA_ECOLI
[Raw transfer]




GG9_A_2(2PQ9)
AROA_ECOLI
[Raw transfer]




RC1_A_2(1X8T)
AROA_ECOLI
[Raw transfer]




S3P_A_2(2QFQ)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3FK0)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3FJX)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3FK1)
AROA_ECOLI
[Raw transfer]




S3P_B_2(1MI4)
AROA_ECOLI
[Raw transfer]




GPJ_A_3(2AAY)
AROA_ECOLI
[Raw transfer]




GPJ_A_2(2QFU)
AROA_ECOLI
[Raw transfer]




FMT_C_3(1MI4)
AROA_ECOLI
[Raw transfer]




S3P_A_2(2QFS)
AROA_ECOLI
[Raw transfer]




GPJ_A_2(2QFT)
AROA_ECOLI
[Raw transfer]




GPJ_A_3(1G6S)
AROA_ECOLI
[Raw transfer]




FMT_A_4(3FK0)
AROA_ECOLI
[Raw transfer]




GPF_A_3(3FK1)
AROA_ECOLI
[Raw transfer]




S3P_A_4(3FJZ)
AROA_ECOLI
[Raw transfer]




GPF_A_3(3FJZ)
AROA_ECOLI
[Raw transfer]




S3P_A_3(2QFU)
AROA_ECOLI
[Raw transfer]




S3P_A_3(2QFT)
AROA_ECOLI
[Raw transfer]




S3P_A_3(1G6T)
AROA_ECOLI
[Raw transfer]




S3P_A_2(1G6S)
AROA_ECOLI
[Raw transfer]




GPJ_A_4(3NVS)
AROA_VIBCH
[Raw transfer]




FMT_A_4(2QFS)
AROA_ECOLI
[Raw transfer]




S3P_A_2(3NVS)
AROA_VIBCH
[Raw transfer]




SKM_A_2(2AA9)
AROA_ECOLI
[Raw transfer]




S3P_A_6(2O0B)
AROA_MYCTU
[Raw transfer]




SKM_A_2(2AAY)
AROA_ECOLI
[Raw transfer]




9 PsiBlast_PDB 99.0999%-121 - C2 -3FJX 6.2 AROA_ECOLI
11 PsiBlast_PDB 98.5799%-122 - C2 -2QFS 6.0 AROA_ECOLI
6 PsiBlast_PDB 98.53100%-123 - C2 -2AAY 4.9 AROA_ECOLI
10 PsiBlast_PDB 98.4899%-119 - C2 -3FJZ 5.8 AROA_ECOLI
12 PsiBlast_PDB 98.4699%-120 - C2 -2QFT 5.8 AROA_ECOLI
3 PsiBlast_PDB 98.44100%-122 - C2 -1X8R 9.7 AROA_ECOLI
8 PsiBlast_PDB 98.3299%-121 - C2 -1MI4 6.4 AROA_ECOLI
7 PsiBlast_PDB 98.23100%-123 - C2 -2PQ9 10.4 AROA_ECOLI
2 PsiBlast_PDB 98.23100%-122 - C2 -1G6T 5.9 AROA_ECOLI
5 PsiBlast_PDB 98.20100%-123 - C2 -2AA9 4.7 AROA_ECOLI
16 PsiBlast_PDB 98.1399%-122 - C2 -3FK0 5.7 AROA_ECOLI
15 PsiBlast_PDB 98.1399%-121 - C2 -2QFU 6.3 AROA_ECOLI
1 PsiBlast_PDB 98.12100%-121 - C2 -1G6S 6.1 AROA_ECOLI
13 PsiBlast_PDB 98.0599%-121 - C2 -1Q36 10.1 AROA_ECOLI
4 PsiBlast_PDB 98.05100%-121 - C2 -1X8T 8.4 AROA_ECOLI
17 PsiBlast_PDB 98.0399%-121 - C2 -3FK1 6.3 AROA_ECOLI
14 PsiBlast_PDB 97.6799%-121 - C2 -2QFQ 6.6 AROA_ECOLI
33 HHSearch 91.5076%-122 - C2 -3NVS 6.2 AROA_VIBCH
34 HHSearch 70.0331%-107 * C2 *2O0B 4.4 AROA_MYCTU