@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00303_DRTS_P: (2014-09-04 )
MMEQVCDVFDIYAICACCKVESKNEGKKNEVFNNYTFRGLGNKGVLPWKCNSLDMKYFRAVTTYVNESKYEKLKYKRCKYLNKETVDNVNDMPNSKKLQNVVVMGRTNWESIPKKFKPLSNRINVILSRTLKKEDFDEDVYIINKVEDLIVLLGKLNYYKCFIIGGSVVYQEFLEKKLIKKIYFTRINSTYECDVFFPEINENEYQIISVSDVYTSNNTTLDFIIYKKTNNKMLNEQNCIKGEEKNNDMPLKNDDKDTCHMKKLTEFYKNVDKYKINYENDDDDEEEDDFVYFNFNKEKEEKNKNSIHPNDFQIYNSLKYKYHPEYQYLNIIYDIMMNGNKQSDRTGVGVLSKFGYIMKFDLSQYFPLLTTKKLFLRGIIEELLWFIRGETNGNTLLNKNVRIWEANGTREFLDNRKLFHREVNDLGPIYGFQWRHFGAEYTNMYDNYENKGVDQLKNIINLIKNDPTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLNRIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMAA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MMV_A_3(4DP3)
?
[Raw transfer]




MMV_B_6(4DP3)
?
[Raw transfer]




1CY_A_3(3UM6)
?
[Raw transfer]




1CY_B_7(3UM8)
?
[Raw transfer]




CP6_A_3(3QGT)
?
[Raw transfer]




CP6_B_6(3QG2)
?
[Raw transfer]




CP6_A_3(3QG2)
?
[Raw transfer]




KA5_A_3(3JSU)
?
[Raw transfer]




CP6_A_3(3UM5)
?
[Raw transfer]




CP6_B_6(3QGT)
?
[Raw transfer]




1CY_A_3(3UM8)
?
[Raw transfer]




KA5_B_6(3JSU)
?
[Raw transfer]




DHF_A_3(4DPD)
?
[Raw transfer]




CP6_A_5(1J3J)
?
[Raw transfer]




CP6_B_8(1J3J)
?
[Raw transfer]




WRA_A_5(1J3K)
DRTS_PLAFK
[Raw transfer]




WRA_B_8(1J3K)
DRTS_PLAFK
[Raw transfer]




RJ6_A_5(3DG8)
?
[Raw transfer]




P65_A_3(4DPH)
?
[Raw transfer]




WRA_B_8(1J3I)
DRTS_PLAFK
[Raw transfer]




NDP_B_9(3DGA)
DRTS_PLAFK
[Raw transfer]




NDP_A_6(3DGA)
DRTS_PLAFK
[Raw transfer]




RJ6_B_8(3DG8)
?
[Raw transfer]




NDP_A_4(4DP3)
?
[Raw transfer]




RJ1_A_5(3DGA)
DRTS_PLAFK
[Raw transfer]




NDP_B_7(4DP3)
?
[Raw transfer]




NDP_B_7(3QGT)
?
[Raw transfer]




NDP_A_6(1J3J)
?
[Raw transfer]




NDP_A_6(1J3K)
DRTS_PLAFK
[Raw transfer]




NDP_B_7(3QG2)
?
[Raw transfer]




NDP_A_4(3QG2)
?
[Raw transfer]




NDP_B_8(3UM8)
?
[Raw transfer]




NDP_B_7(3JSU)
?
[Raw transfer]




NDP_A_4(3UM6)
?
[Raw transfer]




WRA_A_5(1J3I)
DRTS_PLAFK
[Raw transfer]




NDP_A_6(1J3I)
DRTS_PLAFK
[Raw transfer]




NDP_A_4(3UM8)
?
[Raw transfer]




NAP_A_4(4DPD)
?
[Raw transfer]




NDP_B_9(1J3K)
DRTS_PLAFK
[Raw transfer]




NDP_A_4(3UM5)
?
[Raw transfer]




NDP_B_9(1J3I)
DRTS_PLAFK
[Raw transfer]




NDP_A_4(3QGT)
?
[Raw transfer]




RJ1_B_8(3DGA)
DRTS_PLAFK
[Raw transfer]




NDP_B_9(3DG8)
?
[Raw transfer]




WRA_A_4(3RG9)
DRTS_TRYBB
[Raw transfer]




NDP_B_9(1J3J)
?
[Raw transfer]




NDP_A_4(3JSU)
?
[Raw transfer]




NDP_A_6(3DG8)
?
[Raw transfer]




NDP_A_4(4DPH)
?
[Raw transfer]




5 PsiBlast_CBE 98.8599%-135 - C6 -4DP3 10.3 ?
12 PsiBlast_CBE 98.8299%-136 - C6 -3QGT 11.1 ?
14 PsiBlast_CBE 98.6799%-137 - C6 -3UM5 12.1 ?
7 PsiBlast_CBE 98.5399%-136 - C6 -3JSU 11.1 ?
4 PsiBlast_PDB 98.4899%-138 - C6 -4DPH 11.5 ?
10 PsiBlast_CBE 98.4499%-133 - C6 -3UM8 12.0 ?
11 PsiBlast_CBE 98.3399%-137 - C6 -3QGT 10.0 ?
13 PsiBlast_CBE 98.1399%-134 - C6 -3UM6 12.4 ?
2 PsiBlast_PDB 97.6299%-135 - C6 -3QG2 12.0 ?
3 PsiBlast_PDB 97.5699%-134 - C6 -4DP3 12.7 ?
8 PsiBlast_CBE 97.5099%-137 - C6 -4DPD 11.7 ?
1 PsiBlast_PDB 97.4699%-133 - C6 -3JSU 12.1 ?
9 PsiBlast_CBE 97.4499%-133 - C6 -3UM8 10.2 ?
6 PsiBlast_CBE 97.3599%-136 - C6 -3QG2 10.1 ?
29 PsiBlast_CBE 49.4099%-144 - C6 -1J3K 9.7 DRTS_PLAFK
31 PsiBlast_CBE 49.0399%-134 - C6 -3DGA 10.4 DRTS_PLAFK
26 PsiBlast_CBE 48.97100%-140 - C6 -1J3J 10.6 ?
33 PsiBlast_CBE 48.6799%-135 - C6 -1J3I 10.2 DRTS_PLAFK
34 PsiBlast_CBE 48.6599%-138 - C6 -1J3I 12.2 DRTS_PLAFK
32 PsiBlast_CBE 48.6199%-140 - C6 -3DGA 11.3 DRTS_PLAFK
25 PsiBlast_CBE 48.25100%-141 - C6 -1J3J 9.9 ?
30 PsiBlast_CBE 48.0099%-139 - C6 -1J3K 12.7 DRTS_PLAFK
27 PsiBlast_CBE 47.5999%-133 - C6 -3DG8 10.5 ?
28 PsiBlast_CBE 47.2699%-135 - C6 -3DG8 12.0 ?
38 Fugue 32.0731% -62 - C6 -3RG9 6.4 DRTS_TRYBB