@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00303_TYSY_H: (2014-09-04 )
MPVAGSELPRRPLPPAAQERDAEPRPPHGELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRDMESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLKPGDFIHTLGDAHIYLNHIEPLKIQLQREPRPFPKLRILRKVEKIDDFKAEDFQIEGYNPHPTIKMEMAV

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LYA_H_8(1JUJ)
TYSY_HUMAN
[Raw transfer]




NOH_B_4(4EIN)
TYSY_MOUSE
[Raw transfer]




UMP_A_5(4EB4)
TYSY_MOUSE
[Raw transfer]




UMP_A_3(1I00)
TYSY_HUMAN
[Raw transfer]




LYA_F_6(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_6(3NRR)
?
[Raw transfer]




LYA_J_10(1JUJ)
TYSY_HUMAN
[Raw transfer]




NOH_A_2(4EZ8)
TYSY_MOUSE
[Raw transfer]




LYA_L_12(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_C_10(1JU6)
TYSY_HUMAN
[Raw transfer]




LYA_M_13(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_A_3(4FQS)
TYSY_MYCTU
[Raw transfer]




LYA_I_9(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_C_7(1J3K)
?
[Raw transfer]




LYA_G_7(1JU6)
TYSY_HUMAN
[Raw transfer]




DHF_A_3(4EZ8)
TYSY_MOUSE
[Raw transfer]




LYA_K_11(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_A_5(4G9U)
?
[Raw transfer]




DHF_A_3(4EZ8)
TYSY_MOUSE
[Raw transfer]




D16_A_6(4EB4)
TYSY_MOUSE
[Raw transfer]




UMP_A_5(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_6(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_C_9(1JUJ)
TYSY_HUMAN
[Raw transfer]




D16_B_6(1I00)
TYSY_HUMAN
[Raw transfer]




UMP_A_3(4DQ1)
TYSY_STAAM
[Raw transfer]




UMP_G_7(2TSR)
TYSY_RAT
[Raw transfer]




UMP_E_5(1F28)
TYSY_PNECA
[Raw transfer]




UMP_A_5(3QG2)
?
[Raw transfer]




UMP_E_5(2TSR)
TYSY_RAT
[Raw transfer]




D16_A_7(3NRR)
?
[Raw transfer]




D16_K_11(2TSR)
TYSY_RAT
[Raw transfer]




LYA_A_4(4FQS)
TYSY_MYCTU
[Raw transfer]




D16_I_9(2TSR)
TYSY_RAT
[Raw transfer]




GOL_B_5(4EIN)
TYSY_MOUSE
[Raw transfer]




F89_I_9(1F28)
TYSY_PNECA
[Raw transfer]




D16_A_5(1I00)
TYSY_HUMAN
[Raw transfer]




D16_H_8(1HVY)
TYSY_HUMAN
[Raw transfer]




D16_L_12(2TSR)
TYSY_RAT
[Raw transfer]




CIT_A_5(3V8H)
?
[Raw transfer]




UFP_D_8(3EJL)
TYSY_HUMAN
[Raw transfer]




DTT_A_6(4G9U)
?
[Raw transfer]




9MZ_A_5(4E28)
TYSY_HUMAN
[Raw transfer]




7PA_A_4(2ONB)
TYSY_HUMAN
[Raw transfer]




D16_F_6(1HVY)
TYSY_HUMAN
[Raw transfer]




D16_E_5(1HVY)
TYSY_HUMAN
[Raw transfer]




D16_G_7(1HVY)
TYSY_HUMAN
[Raw transfer]




UMP_C_11(1HVY)
TYSY_HUMAN
[Raw transfer]




UMP_A_9(1HVY)
TYSY_HUMAN
[Raw transfer]




BME_A_5(2RD8)
TYSY_HUMAN
[Raw transfer]




69 PsiBlast_CBE 95.1488%-115 - C7 -4EB4 6.6 TYSY_MOUSE
47 PsiBlast_CBE 94.4099%-121 - C7 -3EJL 2.8 TYSY_HUMAN
45 PsiBlast_CBE 94.1599%-121 - C7 -1JU6 6.2 TYSY_HUMAN
3 PsiBlast_PDB 93.8499%-121 - C7 -2RD8 2.0 TYSY_HUMAN
46 PsiBlast_CBE 93.8199%-121 - C7 -1JU6 6.2 TYSY_HUMAN
44 PsiBlast_CBE 93.7899%-121 - C7 -1JU6 5.7 TYSY_HUMAN
89 HHSearch 93.7589%-119 - C7 -4EZ8 6.2 TYSY_MOUSE
10 PsiBlast_PDB 93.4699%-119 - C7 -1JUJ 6.5 TYSY_HUMAN
60 PsiBlast_CBE 93.44100%-122 - C7 -1I00 5.1 TYSY_HUMAN
43 PsiBlast_CBE 93.4099%-119 - C7 -1JUJ 6.7 TYSY_HUMAN
42 PsiBlast_CBE 93.2199%-119 - C7 -1JUJ 6.6 TYSY_HUMAN
9 PsiBlast_PDB 93.0199%-120 - C7 -1JU6 6.2 TYSY_HUMAN
41 PsiBlast_CBE 92.7299%-119 - C7 -1JUJ 6.6 TYSY_HUMAN
61 PsiBlast_CBE 92.44100%-122 - C7 -1I00 5.3 TYSY_HUMAN
79 PsiBlast_CBE 91.7688%-120 - C7 -2TSR 5.5 TYSY_RAT
65 PsiBlast_CBE 91.7188%-121 - C7 -4EIN 4.8 TYSY_MOUSE
81 Fugue 91.6192%-129 - C7 -2TSR 5.3 TYSY_RAT
78 PsiBlast_CBE 91.2388%-125 - C7 -2TSR 5.4 TYSY_RAT
15 PsiBlast_PDB 88.4099%-139 - C7 -4E28 3.0 TYSY_HUMAN
93 HHSearch 86.4053%-111 - C7 -1J3K 5.4 ?
94 HHSearch 86.2463%-111 - C7 -1F28 7.8 TYSY_PNECA
101 HHSearch 86.1553%-114 - C7 -3QG2 4.8 ?
90 HHSearch 85.8668%-120 * C7 *4G9U 5.4 ?
97 HHSearch 83.4254%-110 - C7 -3NRR 6.5 ?
102 HHSearch 80.4850%-114 - C7 -4DQ1 4.8 TYSY_STAAM
106 HHSearch 77.0953%-120 - C7 -4FQS 6.0 TYSY_MYCTU
104 HHSearch 73.1039%-102 - C7 -3V8H 2.2 ?
59 PsiBlast_CBE 70.0599% -24 - C7 -1HVY 3.2 TYSY_HUMAN
57 PsiBlast_CBE 69.4599% -22 - C7 -1HVY 3.7 TYSY_HUMAN
58 PsiBlast_CBE 69.1699% -24 - C7 -1HVY 4.3 TYSY_HUMAN
56 PsiBlast_CBE 68.4499% -22 - C7 -1HVY 4.9 TYSY_HUMAN
54 PsiBlast_CBE 66.2498% -24 - C7 -2ONB 2.4 TYSY_HUMAN