@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00303_TYSY_M: (2014-09-04 )
MLVVGSELQSDAQQLSAEAPRHGELQYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRDEFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQPGDFVHTLGDAHIYLNHIEPLKIQLQREPRPFPKLKILRKVETIDDFKVEDFQIEGYNPHPTIKMEMAV

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LYA_H_8(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_5(4EB4)
TYSY_MOUSE
[Raw transfer]




LYA_J_10(1JUJ)
TYSY_HUMAN
[Raw transfer]




LYA_F_6(1JUJ)
TYSY_HUMAN
[Raw transfer]




LYA_L_12(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_3(1I00)
TYSY_HUMAN
[Raw transfer]




NOH_B_4(4EIN)
TYSY_MOUSE
[Raw transfer]




DHF_A_3(4EZ8)
TYSY_MOUSE
[Raw transfer]




DHF_A_3(4EZ8)
TYSY_MOUSE
[Raw transfer]




LYA_K_11(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_A_6(3NRR)
?
[Raw transfer]




NOH_A_2(4EZ8)
TYSY_MOUSE
[Raw transfer]




LYA_G_7(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_A_6(1JU6)
TYSY_HUMAN
[Raw transfer]




LYA_M_13(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_C_10(1JU6)
TYSY_HUMAN
[Raw transfer]




UMP_A_5(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_3(4FQS)
TYSY_MYCTU
[Raw transfer]




UMP_A_9(1HVY)
TYSY_HUMAN
[Raw transfer]




UMP_C_9(1JUJ)
TYSY_HUMAN
[Raw transfer]




UMP_A_3(4DQ1)
TYSY_STAAM
[Raw transfer]




LYA_I_9(1JU6)
TYSY_HUMAN
[Raw transfer]




D16_A_6(4EB4)
TYSY_MOUSE
[Raw transfer]




UMP_G_7(2TSR)
TYSY_RAT
[Raw transfer]




UMP_C_7(1J3K)
?
[Raw transfer]




UMP_E_5(1F28)
TYSY_PNECA
[Raw transfer]




UMP_E_5(2TSR)
TYSY_RAT
[Raw transfer]




UMP_A_5(4G9U)
?
[Raw transfer]




UMP_A_5(3QG2)
?
[Raw transfer]




UMP_C_3(1RTS)
TYSY_RAT
[Raw transfer]




D16_I_9(2TSR)
TYSY_RAT
[Raw transfer]




D16_A_7(3NRR)
?
[Raw transfer]




LYA_A_4(4FQS)
TYSY_MYCTU
[Raw transfer]




GOL_B_5(4EIN)
TYSY_MOUSE
[Raw transfer]




D16_K_11(2TSR)
TYSY_RAT
[Raw transfer]




D16_F_6(1RTS)
TYSY_RAT
[Raw transfer]




D16_B_6(1I00)
TYSY_HUMAN
[Raw transfer]




D16_J_10(2TSR)
TYSY_RAT
[Raw transfer]




F89_I_9(1F28)
TYSY_PNECA
[Raw transfer]




D16_E_5(1HVY)
TYSY_HUMAN
[Raw transfer]




D16_E_5(1RTS)
TYSY_RAT
[Raw transfer]




D16_L_12(2TSR)
TYSY_RAT
[Raw transfer]




D16_H_8(1HVY)
TYSY_HUMAN
[Raw transfer]




D16_A_5(1I00)
TYSY_HUMAN
[Raw transfer]




D16_G_7(1HVY)
TYSY_HUMAN
[Raw transfer]




9MZ_A_5(4E28)
TYSY_HUMAN
[Raw transfer]




CIT_A_5(3V8H)
?
[Raw transfer]




DTT_A_6(4G9U)
?
[Raw transfer]




UFP_D_8(3EJL)
TYSY_HUMAN
[Raw transfer]




UMP_C_11(1HVY)
TYSY_HUMAN
[Raw transfer]




BME_A_5(2RD8)
TYSY_HUMAN
[Raw transfer]




26 PsiBlast_CBE 95.68100%-113 - C7 -4EB4 6.6 TYSY_MOUSE
91 HHSearch 94.06100%-117 - C7 -4EZ8 6.2 TYSY_MOUSE
22 PsiBlast_CBE 92.69100%-119 - C7 -4EIN 4.8 TYSY_MOUSE
39 PsiBlast_CBE 92.6697%-124 - C7 -1RTS 5.5 TYSY_RAT
38 PsiBlast_CBE 92.5697%-120 - C7 -2TSR 5.6 TYSY_RAT
40 PsiBlast_CBE 92.4197%-123 - C7 -1RTS 5.5 TYSY_RAT
36 PsiBlast_CBE 92.3597%-118 - C7 -2TSR 5.5 TYSY_RAT
35 PsiBlast_CBE 92.2297%-123 - C7 -2TSR 5.4 TYSY_RAT
37 PsiBlast_CBE 92.1297%-120 - C7 -2TSR 5.5 TYSY_RAT
16 PsiBlast_PDB 91.6692%-119 - C7 -1HVY 5.8 TYSY_HUMAN
62 PsiBlast_CBE 91.1188%-120 - C7 -1JU6 5.6 TYSY_HUMAN
70 PsiBlast_CBE 90.7188%-118 - C7 -3EJL 2.8 TYSY_HUMAN
63 PsiBlast_CBE 90.6488%-119 - C7 -1JU6 6.2 TYSY_HUMAN
61 PsiBlast_CBE 90.6388%-119 - C7 -1JU6 5.7 TYSY_HUMAN
75 PsiBlast_CBE 90.3593%-121 - C7 -1I00 5.1 TYSY_HUMAN
6 PsiBlast_PDB 90.1588%-119 - C7 -1JU6 6.2 TYSY_HUMAN
60 PsiBlast_CBE 90.1088%-117 - C7 -1JUJ 6.7 TYSY_HUMAN
7 PsiBlast_PDB 89.8588%-117 - C7 -1JUJ 6.5 TYSY_HUMAN
59 PsiBlast_CBE 89.7188%-117 - C7 -1JUJ 6.6 TYSY_HUMAN
76 PsiBlast_CBE 89.6393%-120 - C7 -1I00 5.3 TYSY_HUMAN
1 PsiBlast_PDB 89.5489%-118 - C7 -2RD8 2.0 TYSY_HUMAN
58 PsiBlast_CBE 89.3488%-117 - C7 -1JUJ 6.6 TYSY_HUMAN
15 PsiBlast_PDB 85.4188%-136 - C7 -4E28 3.0 TYSY_HUMAN
103 HHSearch 84.5455%-114 - C7 -3QG2 4.8 ?
95 HHSearch 84.4455%-112 - C7 -1J3K 5.4 ?
92 HHSearch 84.1966%-117 * C7 *4G9U 5.4 ?
96 HHSearch 84.0163%-110 - C7 -1F28 7.8 TYSY_PNECA
99 HHSearch 80.9654%-110 - C7 -3NRR 6.5 ?
104 HHSearch 77.8752%-114 - C7 -4DQ1 4.8 TYSY_STAAM
108 HHSearch 74.6953%-119 - C7 -4FQS 6.0 TYSY_MYCTU
106 HHSearch 70.8440%-102 - C7 -3V8H 2.2 ?
80 PsiBlast_CBE 63.0692% -20 - C7 -1HVY 3.9 TYSY_HUMAN
79 PsiBlast_CBE 61.9492% -19 - C7 -1HVY 4.6 TYSY_HUMAN