@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00303_TYSY_M: (2014-09-04 )
MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPIYGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTYEDIVVKNYDPHPAIKAPVAV

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PFG_A_4(2BBQ)
TYSY_ECOLI
[Raw transfer]




DHF_A_3(4EZ8)
TYSY_MOUSE
[Raw transfer]




C2F_A_6(4FOG)
TYSY_MYCTU
[Raw transfer]




LYA_A_4(4FQS)
TYSY_MYCTU
[Raw transfer]




LYA_A_4(4FQS)
TYSY_MYCTU
[Raw transfer]




LYA_B_6(4FQS)
TYSY_MYCTU
[Raw transfer]




UFP_C_7(4FOA)
TYSY_MYCTU
[Raw transfer]




F89_I_9(1F28)
TYSY_PNECA
[Raw transfer]




C2F_D_11(4FOG)
TYSY_MYCTU
[Raw transfer]




D16_A_7(3NRR)
?
[Raw transfer]




UMP_A_3(4FQS)
TYSY_MYCTU
[Raw transfer]




F89_A_4(1TLC)
TYSY_ECOLI
[Raw transfer]




UMP_A_6(3NRR)
?
[Raw transfer]




UFP_A_5(4FOG)
TYSY_MYCTU
[Raw transfer]




UMP_A_5(3QJ7)
TYSY_MYCTU
[Raw transfer]




UMP_A_3(2BBQ)
TYSY_ECOLI
[Raw transfer]




F89_A_6(1TSD)
TYSY_ECOLI
[Raw transfer]




F89_E_4(1SYN)
TYSY_ECOLI
[Raw transfer]




UFP_B_7(4FOG)
TYSY_MYCTU
[Raw transfer]




NOH_A_2(4EZ8)
TYSY_MOUSE
[Raw transfer]




CB3_E_5(1TRG)
TYSY_ECOLI
[Raw transfer]




UMP_E_5(1F28)
TYSY_PNECA
[Raw transfer]




UMP_D_9(3QJ7)
TYSY_MYCTU
[Raw transfer]




UMP_B_7(3QJ7)
TYSY_MYCTU
[Raw transfer]




UMP_C_7(1J3K)
?
[Raw transfer]




UFP_A_5(4FOA)
TYSY_MYCTU
[Raw transfer]




CB3_A_6(1TDU)
TYSY_ECOLI
[Raw transfer]




CB3_A_6(1DDU)
TYSY_ECOLI
[Raw transfer]




UMP_C_7(4H0U)
TYSY_CORGL
[Raw transfer]




UMP_A_5(3QG2)
?
[Raw transfer]




UMP_C_8(3QJ7)
TYSY_MYCTU
[Raw transfer]




UMP_A_3(1I00)
TYSY_HUMAN
[Raw transfer]




UMP_C_3(1SYN)
TYSY_ECOLI
[Raw transfer]




UMP_A_5(4G9U)
?
[Raw transfer]




DUR_A_5(1TDU)
TYSY_ECOLI
[Raw transfer]




UMP_A_5(4H0U)
TYSY_CORGL
[Raw transfer]




UMP_A_3(4DQ1)
TYSY_STAAM
[Raw transfer]




DDU_A_5(1DDU)
TYSY_ECOLI
[Raw transfer]




MTX_A_4(1AXW)
TYSY_ECOLI
[Raw transfer]




UMP_C_3(1TRG)
TYSY_ECOLI
[Raw transfer]




DUR_E_5(1BDU)
TYSY_ECOLI
[Raw transfer]




DGP_A_3(1TLC)
TYSY_ECOLI
[Raw transfer]




UMP_C_3(1BID)
TYSY_ECOLI
[Raw transfer]




CB3_A_5(1AN5)
TYSY_ECOLI
[Raw transfer]




C2F_C_9(4FOG)
TYSY_MYCTU
[Raw transfer]




CIT_A_5(3V8H)
?
[Raw transfer]




UMP_A_3(1AXW)
TYSY_ECOLI
[Raw transfer]




UMP_A_5(1TSD)
TYSY_ECOLI
[Raw transfer]




EDO_I_9(1HW4)
TYSY_HUMAN
[Raw transfer]




DTT_A_6(4G9U)
?
[Raw transfer]




D16_A_5(1I00)
TYSY_HUMAN
[Raw transfer]




BME_A_3(1TSD)
TYSY_ECOLI
[Raw transfer]




55 HHSearch 96.92100%-136 - C8 -4FQS 5.8 TYSY_MYCTU
27 PsiBlast_CBE 96.47100%-135 - C8 -4FQS 5.4 TYSY_MYCTU
35 PsiBlast_CBE 96.10100%-138 - C8 -4FOG 5.9 TYSY_MYCTU
22 PsiBlast_CBE 96.09100%-139 - C8 -4FOA 5.7 TYSY_MYCTU
24 PsiBlast_CBE 95.90100%-141 - C8 -3QJ7 4.4 TYSY_MYCTU
2 PsiBlast_PDB 95.85100%-139 - C8 -4FOA 4.7 TYSY_MYCTU
21 PsiBlast_CBE 95.75100%-139 - C8 -4FOA - TYSY_MYCTU
25 PsiBlast_CBE 95.67100%-141 - C8 -3QJ7 4.8 TYSY_MYCTU
3 PsiBlast_PDB 95.59100%-141 - C8 -4FOG 5.3 TYSY_MYCTU
26 PsiBlast_CBE 95.52100%-142 - C8 -3QJ7 4.5 TYSY_MYCTU
36 PsiBlast_CBE 95.40100%-134 - C8 -4FOG 5.7 TYSY_MYCTU
37 PsiBlast_CBE 95.28100%-141 - C8 -4FOG 3.3 TYSY_MYCTU
1 PsiBlast_PDB 95.26100%-138 - C8 -3QJ7 5.8 TYSY_MYCTU
23 PsiBlast_CBE 95.01100%-141 - C8 -4FOA - TYSY_MYCTU
41 PsiBlast_CBE 86.4473%-141 - C8 -4H0U 4.3 TYSY_CORGL
38 PsiBlast_CBE 86.2473%-143 - C8 -4H0U - TYSY_CORGL
40 PsiBlast_CBE 85.6073%-139 - C8 -4H0U - TYSY_CORGL
39 PsiBlast_CBE 84.2173%-137 - C8 -4H0U 4.7 TYSY_CORGL
20 PsiBlast_PDB 84.1866%-127 - C8 -2BBQ 7.5 TYSY_ECOLI
52 HHSearch 80.8058%-132 - C8 -4DQ1 4.8 TYSY_STAAM
67 HHSearch 79.8849%-132 - C8 -3NRR 6.1 ?
59 HHSearch 79.5150%-133 - C8 -4G9U 5.4 ?
72 HHSearch 79.3945%-131 - C8 -3QG2 4.7 ?
58 HHSearch 79.2853%-124 * C8 *4EZ8 4.8 TYSY_MOUSE
63 HHSearch 79.1945%-129 - C8 -1J3K 5.4 ?
65 HHSearch 79.0953%-138 - C8 -1HW4 2.3 TYSY_HUMAN
8 PsiBlast_PDB 77.9350%-126 - C8 -1I00 5.3 TYSY_HUMAN
60 HHSearch 77.8848%-121 - C8 -1F28 6.6 TYSY_PNECA
64 HHSearch 70.3541%-121 - C8 -3V8H 3.2 ?
18 PsiBlast_PDB 48.7566% -29 - C8 -1TRG 4.5 TYSY_ECOLI
9 PsiBlast_PDB 48.7066% -26 - C8 -1TLC 5.0 TYSY_ECOLI
10 PsiBlast_PDB 48.5466% -28 - C8 -1TSD 5.3 TYSY_ECOLI
19 PsiBlast_PDB 48.0866% -26 - C8 -1SYN 5.2 TYSY_ECOLI
12 PsiBlast_PDB 47.8266% -29 - C8 -1TDU 4.1 TYSY_ECOLI
16 PsiBlast_PDB 47.7966% -25 - C8 -1BID 2.9 TYSY_ECOLI
15 PsiBlast_PDB 47.7866% -23 - C8 -1BDU 2.7 TYSY_ECOLI
14 PsiBlast_PDB 47.6366% -27 - C8 -1AXW 5.2 TYSY_ECOLI
11 PsiBlast_PDB 47.5566% -24 - C8 -1DDU 4.1 TYSY_ECOLI
13 PsiBlast_PDB 47.2666% -24 - C8 -1AN5 5.6 TYSY_ECOLI