@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00337_LEG3_H: (2014-09-05 )
MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAT_A_3(3AYE)
LEG3_HUMAN
[Raw transfer]




LAT_A_2(2NN8)
LEG3_HUMAN
[Raw transfer]




LAT_B_6(3AYE)
LEG3_HUMAN
[Raw transfer]




LAT_A_2(3ZSJ)
LEG3_HUMAN
[Raw transfer]




TDG_A_4(4JC1)
LEG3_HUMAN
[Raw transfer]




MQT_A_3(3T1L)
LEG3_HUMAN
[Raw transfer]




SUGAR_A_2(1KJL)
LEG3_HUMAN
[Raw transfer]

-

1LL_A_3(4JCK)
LEG3_HUMAN
[Raw transfer]




SUGAR_A_4(2XG3)
LEG3_HUMAN
[Raw transfer]

-

SUGAR_A_2(1A3K)
LEG3_HUMAN
[Raw transfer]

-

DQT_A_3(3T1M)
LEG3_HUMAN
[Raw transfer]




GOL_A_2(3ZSK)
LEG3_HUMAN
[Raw transfer]




GOL_A_3(3AYC)
LEG3_HUMAN
[Raw transfer]




LAT_D_4(2D6M)
LEG9_MOUSE
[Raw transfer]




LBT_A_2(3I8T)
LEG4_MOUSE
[Raw transfer]




SUGAR_A_2(4LBN)
?
[Raw transfer]

-

SUGAR_A_2(2ZHN)
LEG9_HUMAN
[Raw transfer]

-

GOL_A_3(3ZSK)
LEG3_HUMAN
[Raw transfer]




SUGAR_A_3(1HLC)
LEG2_HUMAN
[Raw transfer]

-

SUGAR_A_2(2NMO)
LEG3_HUMAN
[Raw transfer]

-

SUGAR_B_2(2NMN)
LEG3_HUMAN
[Raw transfer]

-

NAG_A_3(1KJR)
LEG3_HUMAN
[Raw transfer]




SUGAR_A_2(4LBM)
?
[Raw transfer]

-

SUGAR_A_3(4LBK)
?
[Raw transfer]

-

SUGAR_A_5(4LBO)
?
[Raw transfer]

-

SUGAR_A_2(3AP9)
LEG8_HUMAN
[Raw transfer]

-

SUGAR_A_3(4LBJ)
?
[Raw transfer]

-

SUGAR_A_2(4LBL)
?
[Raw transfer]

-

SUGAR_B_7(3AYA)
LEG3_HUMAN
[Raw transfer]

-

SUGAR_A_4(3AYA)
LEG3_HUMAN
[Raw transfer]

-

SUGAR_A_3(3AYD)
LEG3_HUMAN
[Raw transfer]

-

UNU_A_3(2XG3)
LEG3_HUMAN
[Raw transfer]




SUGAR_B_6(3AYC)
LEG3_HUMAN
[Raw transfer]

-

SUGAR_A_2(1KJR)
LEG3_HUMAN
[Raw transfer]

-

7 PsiBlast_PDB 96.20100%-149 - C5 -4LBM 4.3 ?
8 PsiBlast_PDB 95.98100%-149 - C5 -4LBN 4.7 ?
18 PsiBlast_PDB 95.91100%-150 - C5 -1A3K 3.8 LEG3_HUMAN
3 PsiBlast_PDB 95.78100%-151 - C5 -3T1L 3.9 LEG3_HUMAN
6 PsiBlast_PDB 95.74100%-150 - C5 -4JCK 3.1 LEG3_HUMAN
12 PsiBlast_PDB 95.71100%-143 - C5 -3ZSJ 3.8 LEG3_HUMAN
5 PsiBlast_PDB 95.57100%-150 - C5 -4JC1 3.9 LEG3_HUMAN
13 PsiBlast_PDB 95.46100%-148 - C5 -4LBO 3.9 ?
9 PsiBlast_PDB 95.37100%-150 - C5 -2NMN 3.5 LEG3_HUMAN
4 PsiBlast_PDB 95.36100%-150 - C5 -3T1M 5.7 LEG3_HUMAN
21 PsiBlast_CBE 95.2999%-148 - C5 -4LBL 3.8 ?
11 PsiBlast_PDB 95.21100%-146 - C5 -2NN8 3.8 LEG3_HUMAN
14 PsiBlast_PDB 95.20100%-146 - C5 -3ZSK 3.2 LEG3_HUMAN
2 PsiBlast_PDB 95.20100%-147 - C5 -1KJR 4.7 LEG3_HUMAN
17 PsiBlast_PDB 95.16100%-148 - C5 -2XG3 4.1 LEG3_HUMAN
1 PsiBlast_PDB 95.00100%-143 - C5 -1KJL 4.0 LEG3_HUMAN
20 PsiBlast_PDB 94.8899%-147 - C5 -4LBK 4.8 ?
10 PsiBlast_PDB 94.85100%-144 - C5 -2NMO 3.8 LEG3_HUMAN
19 PsiBlast_PDB 94.7699%-145 - C5 -4LBJ 4.3 ?
27 PsiBlast_CBE 94.3599%-142 - C5 -3AYA 3.5 LEG3_HUMAN
28 PsiBlast_CBE 93.7399%-138 - C5 -3AYA 3.4 LEG3_HUMAN
22 PsiBlast_CBE 93.5699%-141 - C5 -3AYE 3.8 LEG3_HUMAN
23 PsiBlast_CBE 93.1899%-140 - C5 -3AYE 3.7 LEG3_HUMAN
24 PsiBlast_CBE 93.1699%-142 - C5 -3AYD 3.4 LEG3_HUMAN
26 PsiBlast_CBE 92.9499%-137 - C5 -3AYC 2.5 LEG3_HUMAN
25 PsiBlast_CBE 92.6799%-138 - C5 -3AYC 3.6 LEG3_HUMAN
45 HHSearch 77.0140%-129 - C5 -2ZHN 4.3 LEG9_HUMAN
50 HHSearch 76.3840%-131 - C5 -2D6M 4.1 LEG9_MOUSE
48 HHSearch 76.0541%-133 - C5 -3AP9 4.6 LEG8_HUMAN
49 HHSearch 73.9536%-120 - C5 -4GXL -
53 HHSearch 73.7738%-128 * C5 *3I8T 3.8 LEG4_MOUSE
59 HHSearch 61.5030%-106 - C5 -1HLC 3.0 LEG2_HUMAN