@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00343_PYGM_H: (2014-09-05 )
MSRPLSDQEKRKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKISGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGHVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRILVDLERMDWDKAWDVTVRTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEVIAERIGEDFISDLDQLRKLLSFVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDIQVKRIHEYKRQLLNCLHVITLYNRIKREPNKFFVPRTVMIGGKAAPGYHMAKMIIRLVTAIGDVVNHDPAVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDKLDQRGYNAQEYYDRIPELRQVIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEDYIKCQEKVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAPDEAI

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

7GP_E_5(2F3S)
PYGM_RABIT
[Raw transfer]



6GP_E_5(2F3Q)
PYGM_RABIT
[Raw transfer]



8GP_E_5(2F3U)
PYGM_RABIT
[Raw transfer]



IMK_D_4(1XKX)
PYGM_RABIT
[Raw transfer]



CAW_A_4(3ZCS)
PYGM_RABIT
[Raw transfer]



T68_A_2(3ZCU)
PYGM_RABIT
[Raw transfer]



H53_E_5(2FET)
PYGM_RABIT
[Raw transfer]



C3B_A_3(3BD8)
PYGM_RABIT
[Raw transfer]



TH1_B_2(1XL1)
PYGM_RABIT
[Raw transfer]



62N_A_3(3ZCQ)
PYGM_RABIT
[Raw transfer]



VMP_A_5(3ZCT)
PYGM_RABIT
[Raw transfer]



N85_A_3(3ZCV)
PYGM_RABIT
[Raw transfer]



4GP_E_5(2F3P)
PYGM_RABIT
[Raw transfer]



F85_A_4(3ZCR)
PYGM_RABIT
[Raw transfer]



H53_E_5(2FF5)
PYGM_RABIT
[Raw transfer]



OX2_B_2(1XL0)
PYGM_RABIT
[Raw transfer]



GL6_C_3(1XC7)
PYGM_RABIT
[Raw transfer]



GOL_A_4(2AMV)
PYGM_RABIT
[Raw transfer]



F58_A_3(3ZCP)
PYGM_RABIT
[Raw transfer]



GLC_A_4(1E1Y)
PYGM_RABIT
[Raw transfer]



GLC_C_3(2GPA)
PYGM_RABIT
[Raw transfer]



HTP_I_9(1AXR)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3BDA)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3ZCT)
PYGM_RABIT
[Raw transfer]



PLP_A_4(3ZCV)
PYGM_RABIT
[Raw transfer]



PLP_A_5(1XKX)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3BD8)
PYGM_RABIT
[Raw transfer]



PLP_A_3(3ZCU)
PYGM_RABIT
[Raw transfer]



PLP_A_3(2F3Q)
PYGM_RABIT
[Raw transfer]



PLR_A_10(2GJ4)
PYGM_RABIT
[Raw transfer]



PLP_A_6(2GPA)
PYGM_RABIT
[Raw transfer]



PLP_A_2(2AMV)
PYGM_RABIT
[Raw transfer]



PLP_A_3(2F3S)
PYGM_RABIT
[Raw transfer]



PLP_A_3(2F3P)
PYGM_RABIT
[Raw transfer]



PLP_A_3(2F3U)
PYGM_RABIT
[Raw transfer]



PLP_A_3(1XL0)
PYGM_RABIT
[Raw transfer]



PLP_A_3(1XL1)
PYGM_RABIT
[Raw transfer]



PLP_E_5(1GPY)
PYGM_RABIT
[Raw transfer]



PLP_C_3(8GPB)
PYGM_RABIT
[Raw transfer]



PLP_C_3(2FET)
PYGM_RABIT
[Raw transfer]



PLP_A_5(1E1Y)
PYGM_RABIT
[Raw transfer]



PLP_C_3(2FF5)
PYGM_RABIT
[Raw transfer]



PLP_G_7(1AXR)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3BD7)
PYGM_RABIT
[Raw transfer]



PLP_A_3(1Z62)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3ZCS)
PYGM_RABIT
[Raw transfer]



PLP_A_3(3ZCR)
PYGM_RABIT
[Raw transfer]



PLP_A_7(1XC7)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3ZCP)
PYGM_RABIT
[Raw transfer]



PLP_A_2(3ZCQ)
PYGM_RABIT
[Raw transfer]
36 PsiBlast_CBE 99.4697% -93 - C4 -8GPB 3.4 PYGM_RABIT
18 PsiBlast_CBE 99.2697% -94 - C4 -2AMV 3.1 PYGM_RABIT
52 HHSearch 99.1997% -97 - C4 -2GJ4 3.8 PYGM_RABIT
31 PsiBlast_CBE 99.0597% -94 - C4 -1AXR 4.2 PYGM_RABIT
29 PsiBlast_CBE 99.0397% -93 - C4 -1GPY 3.3 PYGM_RABIT
7 PsiBlast_CBE 99.0297% -96 - C4 -3ZCS 6.6 PYGM_RABIT
1 PsiBlast_CBE 99.0097% -96 - C4 -3ZCV 6.8 PYGM_RABIT
5 PsiBlast_CBE 98.9797% -95 - C4 -3ZCQ 7.1 PYGM_RABIT
3 PsiBlast_CBE 98.8797% -96 - C4 -3ZCT 6.8 PYGM_RABIT
4 PsiBlast_CBE 98.7697% -95 - C4 -3ZCR 7.8 PYGM_RABIT
30 PsiBlast_CBE 98.7597% -95 - C4 -1E1Y 4.2 PYGM_RABIT
6 PsiBlast_CBE 98.7397% -96 - C4 -3ZCP 6.0 PYGM_RABIT
22 PsiBlast_CBE 98.7097% -94 - C4 -1XKX 6.9 PYGM_RABIT
21 PsiBlast_CBE 98.7097% -95 - C4 -1XL0 5.5 PYGM_RABIT
17 PsiBlast_CBE 98.7097% -93 - C4 -2F3P 5.0 PYGM_RABIT
9 PsiBlast_CBE 98.7097% -94 - C4 -3BD8 6.4 PYGM_RABIT
23 PsiBlast_CBE 98.6997% -95 - C4 -1XC7 5.2 PYGM_RABIT
19 PsiBlast_CBE 98.6997% -95 - C4 -1Z62 3.7 PYGM_RABIT
10 PsiBlast_CBE 98.6997% -94 - C4 -3BD7 2.8 PYGM_RABIT
11 PsiBlast_CBE 98.6897% -95 - C4 -2GPA 3.9 PYGM_RABIT
2 PsiBlast_CBE 98.6897% -94 - C4 -3ZCU 5.9 PYGM_RABIT
20 PsiBlast_CBE 98.6197% -94 - C4 -1XL1 6.6 PYGM_RABIT
8 PsiBlast_CBE 98.5897% -94 - C4 -3BDA 3.0 PYGM_RABIT
12 PsiBlast_CBE 98.5397% -94 - C4 -2FF5 5.8 PYGM_RABIT
16 PsiBlast_CBE 98.5197% -95 - C4 -2F3Q 5.7 PYGM_RABIT
14 PsiBlast_CBE 98.4297% -95 - C4 -2F3U 5.7 PYGM_RABIT
13 PsiBlast_CBE 98.4297% -94 - C4 -2FET 6.1 PYGM_RABIT
15 PsiBlast_CBE 98.4197% -94 - C4 -2F3S 6.0 PYGM_RABIT