@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00343_PYGM_R: (2014-09-05 )
MSRPLSDQEKRKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAPDEKIP

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6GP_E_5(2F3Q)
PYGM_RABIT
[Raw transfer]




AZC_C_3(1KTI)
PYGM_RABIT
[Raw transfer]




HBZ_A_3(2QN7)
PYGM_RABIT
[Raw transfer]




8GP_E_5(2F3U)
PYGM_RABIT
[Raw transfer]




T68_A_2(3ZCU)
PYGM_RABIT
[Raw transfer]




IMK_D_4(1XKX)
PYGM_RABIT
[Raw transfer]




7GP_E_5(2F3S)
PYGM_RABIT
[Raw transfer]




NBX_A_3(2QN9)
PYGM_RABIT
[Raw transfer]




N85_A_3(3ZCV)
PYGM_RABIT
[Raw transfer]




62N_A_3(3ZCQ)
PYGM_RABIT
[Raw transfer]




VMP_A_5(3ZCT)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FET)
PYGM_RABIT
[Raw transfer]




TH1_B_2(1XL1)
PYGM_RABIT
[Raw transfer]




CAW_A_4(3ZCS)
PYGM_RABIT
[Raw transfer]




4GP_E_5(2F3P)
PYGM_RABIT
[Raw transfer]




F58_A_3(3ZCP)
PYGM_RABIT
[Raw transfer]




G1P_C_3(3GPB)
PYGM_RABIT
[Raw transfer]




F85_A_4(3ZCR)
PYGM_RABIT
[Raw transfer]




OX2_B_2(1XL0)
PYGM_RABIT
[Raw transfer]




H53_E_5(2FF5)
PYGM_RABIT
[Raw transfer]




CR6_C_3(1P4H)
PYGM_RABIT
[Raw transfer]




NBG_C_3(2PRJ)
PYGM_RABIT
[Raw transfer]




GPM_C_3(5GPB)
PYGM_RABIT
[Raw transfer]




GL6_C_3(1XC7)
PYGM_RABIT
[Raw transfer]




GLC_A_4(1E1Y)
PYGM_RABIT
[Raw transfer]




GLC_C_3(2SKD)
PYGM_RABIT
[Raw transfer]




GFP_C_3(4GPB)
PYGM_RABIT
[Raw transfer]




CGF_C_3(1P4G)
PYGM_RABIT
[Raw transfer]




GLC_C_3(2SKE)
PYGM_RABIT
[Raw transfer]




GLC_C_3(2GPB)
PYGM_RABIT
[Raw transfer]




GLC_C_3(2SKC)
PYGM_RABIT
[Raw transfer]




GOL_A_4(2AMV)
PYGM_RABIT
[Raw transfer]




CBF_E_5(1P4J)
PYGM_RABIT
[Raw transfer]




NBG_C_3(1WW2)
PYGM_RABIT
[Raw transfer]




NTF_C_3(1WW3)
PYGM_RABIT
[Raw transfer]




H2P_C_3(6GPB)
PYGM_RABIT
[Raw transfer]




HTP_I_9(1AXR)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1XL1)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WUT)
PYGM_RABIT
[Raw transfer]




PLP_A_3(2F3Q)
PYGM_RABIT
[Raw transfer]




PLR_A_10(2GJ4)
PYGM_RABIT
[Raw transfer]




PLP_E_5(1GPY)
PYGM_RABIT
[Raw transfer]




PLP_A_3(2F3P)
PYGM_RABIT
[Raw transfer]




PLP_A_2(2QN7)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1XKX)
PYGM_RABIT
[Raw transfer]




PLP_A_2(3ZCT)
PYGM_RABIT
[Raw transfer]




PLP_A_4(3ZCV)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WV1)
PYGM_RABIT
[Raw transfer]




PLP_G_7(3GPB)
PYGM_RABIT
[Raw transfer]




PLP_I_9(5GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_3(2F3U)
PYGM_RABIT
[Raw transfer]




PLP_A_3(3ZCU)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WV0)
PYGM_RABIT
[Raw transfer]




PLP_E_5(2GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_2(2QN9)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1P4J)
PYGM_RABIT
[Raw transfer]




PLP_A_2(1WUY)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1E1Y)
PYGM_RABIT
[Raw transfer]




PLP_C_3(2FET)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1XL0)
PYGM_RABIT
[Raw transfer]




PLP_G_7(4GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1WW2)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRI)
PYGM_RABIT
[Raw transfer]




PLP_C_3(2FF5)
PYGM_RABIT
[Raw transfer]




PLP_A_7(1P4H)
PYGM_RABIT
[Raw transfer]




PLP_C_3(8GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_3(1Z62)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1KTI)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1WW3)
PYGM_RABIT
[Raw transfer]




PLP_A_3(2F3S)
PYGM_RABIT
[Raw transfer]




PLP_A_2(2AMV)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2PRJ)
PYGM_RABIT
[Raw transfer]




PLP_G_7(1AXR)
PYGM_RABIT
[Raw transfer]




PLP_A_7(1XC7)
PYGM_RABIT
[Raw transfer]




PLP_A_2(3BD7)
PYGM_RABIT
[Raw transfer]




PLP_A_3(3ZCR)
PYGM_RABIT
[Raw transfer]




PLP_A_5(1P4G)
PYGM_RABIT
[Raw transfer]




PLP_A_2(3ZCP)
PYGM_RABIT
[Raw transfer]




PLP_A_2(3ZCS)
PYGM_RABIT
[Raw transfer]




PLP_A_2(3ZCQ)
PYGM_RABIT
[Raw transfer]




PLP_I_9(6GPB)
PYGM_RABIT
[Raw transfer]




AMP_G_7(8GPB)
PYGM_RABIT
[Raw transfer]




AMP_K_11(6GPB)
PYGM_RABIT
[Raw transfer]




PLP_A_7(2SKD)
PYGM_RABIT
[Raw transfer]




CPB_A_2(1E1Y)
PYGM_RABIT
[Raw transfer]




PLP_A_7(2SKE)
PYGM_RABIT
[Raw transfer]




PLP_A_5(2SKC)
PYGM_RABIT
[Raw transfer]




IAA_I_9(1Z62)
PYGM_RABIT
[Raw transfer]




30 PsiBlast_CBE 99.4699% -92 - C11 -8GPB 4.3 PYGM_RABIT
37 PsiBlast_CBE 99.3699% -93 - C11 -4GPB 4.7 PYGM_RABIT
72 HHSearch 99.09100% -97 * C11 *2GJ4 3.8 PYGM_RABIT
35 PsiBlast_CBE 99.0699% -92 - C11 -6GPB 4.4 PYGM_RABIT
4 PsiBlast_PDB 98.95100% -93 - C11 -2AMV 3.1 PYGM_RABIT
38 PsiBlast_CBE 98.9399% -92 - C11 -3GPB 4.6 PYGM_RABIT
19 PsiBlast_PDB 98.91100% -92 - C11 -1GPY 3.3 PYGM_RABIT
41 PsiBlast_CBE 98.8899% -91 - C11 -2SKC 4.2 PYGM_RABIT
50 PsiBlast_CBE 98.8799% -92 - C11 -2GPB 3.8 PYGM_RABIT
18 PsiBlast_PDB 98.87100% -93 - C11 -1AXR 4.2 PYGM_RABIT
45 PsiBlast_CBE 98.8099% -91 - C11 -2PRI 3.9 PYGM_RABIT
39 PsiBlast_CBE 98.7999% -91 - C11 -2SKE 3.9 PYGM_RABIT
40 PsiBlast_CBE 98.7899% -91 - C11 -2SKD 4.2 PYGM_RABIT
21 PsiBlast_CBE 98.78100% -95 - C11 -3ZCV 6.8 PYGM_RABIT
52 PsiBlast_CBE 98.7699% -93 - C11 -1WW2 4.5 PYGM_RABIT
23 PsiBlast_CBE 98.75100% -95 - C11 -3ZCT 6.8 PYGM_RABIT
25 PsiBlast_CBE 98.74100% -94 - C11 -3ZCQ 7.1 PYGM_RABIT
1 PsiBlast_PDB 98.7099% -95 - C11 -3ZCS 6.6 PYGM_RABIT
22 PsiBlast_CBE 98.69100% -93 - C11 -3ZCU 5.9 PYGM_RABIT
24 PsiBlast_CBE 98.67100% -94 - C11 -3ZCR 7.8 PYGM_RABIT
11 PsiBlast_PDB 98.64100% -94 - C11 -1Z62 5.2 PYGM_RABIT
44 PsiBlast_CBE 98.5999% -91 - C11 -2PRJ 4.8 PYGM_RABIT
12 PsiBlast_PDB 98.58100% -92 - C11 -2F3P 5.0 PYGM_RABIT
55 PsiBlast_CBE 98.5599% -92 - C11 -1WUY 3.5 PYGM_RABIT
51 PsiBlast_CBE 98.5599% -95 - C11 -1WW3 5.5 PYGM_RABIT
9 PsiBlast_PDB 98.55100% -94 - C11 -1XL0 5.5 PYGM_RABIT
8 PsiBlast_PDB 98.54100% -94 - C11 -1XKX 6.9 PYGM_RABIT
20 PsiBlast_PDB 98.46100% -93 - C11 -3BD7 2.8 PYGM_RABIT
2 PsiBlast_PDB 98.4699% -95 - C11 -3ZCP 6.0 PYGM_RABIT
43 PsiBlast_CBE 98.4399% -95 - C11 -2QN7 6.4 PYGM_RABIT
7 PsiBlast_PDB 98.41100% -93 - C11 -1XC7 5.2 PYGM_RABIT
54 PsiBlast_CBE 98.4099% -92 - C11 -1WV0 3.7 PYGM_RABIT
53 PsiBlast_CBE 98.4099% -92 - C11 -1WV1 3.7 PYGM_RABIT
10 PsiBlast_PDB 98.36100% -93 - C11 -1XL1 6.6 PYGM_RABIT
13 PsiBlast_PDB 98.33100% -94 - C11 -2F3Q 5.7 PYGM_RABIT
42 PsiBlast_CBE 98.3299% -94 - C11 -2QN9 6.2 PYGM_RABIT
56 PsiBlast_CBE 98.3199% -92 - C11 -1WUT 3.7 PYGM_RABIT
15 PsiBlast_PDB 98.29100% -94 - C11 -2F3U 5.7 PYGM_RABIT
60 PsiBlast_CBE 98.2599% -94 - C11 -1KTI 5.1 PYGM_RABIT
17 PsiBlast_PDB 98.24100% -93 - C11 -2FF5 5.8 PYGM_RABIT
16 PsiBlast_PDB 98.24100% -93 - C11 -2FET 6.1 PYGM_RABIT
14 PsiBlast_PDB 98.24100% -93 - C11 -2F3S 6.0 PYGM_RABIT
5 PsiBlast_PDB 98.23100% -94 - C11 -1E1Y 6.6 PYGM_RABIT
57 PsiBlast_CBE 98.1899% -93 - C11 -1P4J 4.5 PYGM_RABIT
58 PsiBlast_CBE 98.0199% -93 - C11 -1P4H 5.1 PYGM_RABIT
59 PsiBlast_CBE 97.9899% -93 - C11 -1P4G 4.5 PYGM_RABIT
36 PsiBlast_CBE 90.9899% -93 - C11 -5GPB 4.4 PYGM_RABIT