@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00348_GGPPS_: (2014-09-05 )
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVHYLEDVGSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKMFKEENE

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SC0_A_4(2Z4Z)
GGPPS_YEAST
[Raw transfer]




M0N_A_7(2E92)
GGPPS_YEAST
[Raw transfer]




B29_C_3(2E93)
GGPPS_YEAST
[Raw transfer]




GRG_A_7(2Z4V)
GGPPS_YEAST
[Raw transfer]




364_A_4(2E94)
GGPPS_YEAST
[Raw transfer]




749_A_7(2Z4W)
GGPPS_YEAST
[Raw transfer]




B71_A_3(2ZEU)
GGPPS_YEAST
[Raw transfer]




ZOL_A_7(2E91)
GGPPS_YEAST
[Raw transfer]




742_A_5(2Z7I)
GGPPS_YEAST
[Raw transfer]




H86_A_3(2Z78)
GGPPS_YEAST
[Raw transfer]




252_A_4(2Z4Y)
GGPPS_YEAST
[Raw transfer]




IPE_A_7(2E8W)
GGPPS_YEAST
[Raw transfer]




IPE_A_8(2E8U)
GGPPS_YEAST
[Raw transfer]




H23_A_9(2Z52)
GGPPS_YEAST
[Raw transfer]




GPP_B_8(2E8X)
GGPPS_YEAST
[Raw transfer]




FPS_A_9(2E8T)
GGPPS_YEAST
[Raw transfer]




B75_A_7(2E95)
GGPPS_YEAST
[Raw transfer]




GRG_C_3(2E8V)
GGPPS_YEAST
[Raw transfer]




GRG_C_3(2E8V)
GGPPS_YEAST
[Raw transfer]




B29_D_4(2E93)
GGPPS_YEAST
[Raw transfer]




252_A_5(2Z4Y)
GGPPS_YEAST
[Raw transfer]




IPE_A_7(2E8U)
GGPPS_YEAST
[Raw transfer]




IPE_A_7(2E8T)
GGPPS_YEAST
[Raw transfer]




27 Fugue 69.0141% -77 - C1 -2E8X 4.0 GGPPS_YEAST
37 HHSearch 67.7741% -85 - C1 -2E8V 9.1 GGPPS_YEAST
18 PsiBlast_PDB 63.9743% -87 - C1 -2Z78 8.8 GGPPS_YEAST
19 PsiBlast_PDB 63.6743% -88 - C1 -2Z7I 6.6 GGPPS_YEAST
10 PsiBlast_PDB 63.1743% -84 - C1 -2E93 7.8 GGPPS_YEAST
20 PsiBlast_PDB 62.8343% -89 - C1 -2ZEU 7.0 GGPPS_YEAST
11 PsiBlast_PDB 62.7343% -83 - C1 -2E94 6.4 GGPPS_YEAST
8 PsiBlast_PDB 62.5143% -85 - C1 -2E91 3.2 GGPPS_YEAST
3 PsiBlast_PDB 62.3543% -90 - C1 -2E8T 4.9 GGPPS_YEAST
9 PsiBlast_PDB 62.1643% -88 - C1 -2E92 3.9 GGPPS_YEAST
16 PsiBlast_PDB 61.8943% -87 - C1 -2Z4Z 6.6 GGPPS_YEAST
6 PsiBlast_PDB 61.6843% -86 - C1 -2E8W 3.6 GGPPS_YEAST
14 PsiBlast_PDB 61.6443% -89 - C1 -2Z4W 7.4 GGPPS_YEAST
17 PsiBlast_PDB 61.3543% -90 - C1 -2Z52 4.3 GGPPS_YEAST
13 PsiBlast_PDB 60.9943% -87 - C1 -2Z4V 8.3 GGPPS_YEAST
15 PsiBlast_PDB 60.6343% -87 - C1 -2Z4Y 4.7 GGPPS_YEAST
12 PsiBlast_PDB 60.1943% -85 - C1 -2E95 4.0 GGPPS_YEAST
4 PsiBlast_PDB 59.8943% -88 - C1 -2E8U 4.2 GGPPS_YEAST